Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIX6O95475 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIX6O95475 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SIX6O95475 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX6O95475 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX6O95475 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.53■□□□□ 0.4
SIX6O95475 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SIX6O95475 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SIX6O95475 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.53■□□□□ 0.4
SIX6O95475 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX6O95475 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX6O95475 MIR4281-201ENST00000580852 62 ntBASIC17.53■□□□□ 0.4
SIX6O95475 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.53■□□□□ 0.4
SIX6O95475 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX6O95475 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SIX6O95475 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX6O95475 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SIX6O95475 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX6O95475 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SIX6O95475 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.52■□□□□ 0.4
SIX6O95475 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX6O95475 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIX6O95475 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
SIX6O95475 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX6O95475 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SIX6O95475 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.52■□□□□ 0.4
SIX6O95475 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SIX6O95475 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.52■□□□□ 0.4
SIX6O95475 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX6O95475 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SIX6O95475 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SIX6O95475 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIX6O95475 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIX6O95475 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIX6O95475 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.52■□□□□ 0.39
SIX6O95475 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIX6O95475 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SIX6O95475 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX6O95475 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX6O95475 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX6O95475 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIX6O95475 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.51■□□□□ 0.39
SIX6O95475 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SIX6O95475 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX6O95475 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX6O95475 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX6O95475 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX6O95475 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SIX6O95475 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX6O95475 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX6O95475 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX6O95475 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX6O95475 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX6O95475 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.51■□□□□ 0.39
SIX6O95475 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.5■□□□□ 0.39
SIX6O95475 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SIX6O95475 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.5■□□□□ 0.39
SIX6O95475 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.5■□□□□ 0.39
SIX6O95475 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.5■□□□□ 0.39
SIX6O95475 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.5■□□□□ 0.39
SIX6O95475 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SIX6O95475 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SIX6O95475 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SIX6O95475 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX6O95475 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.5■□□□□ 0.39
SIX6O95475 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.5■□□□□ 0.39
SIX6O95475 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX6O95475 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX6O95475 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SIX6O95475 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX6O95475 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SIX6O95475 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX6O95475 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SIX6O95475 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX6O95475 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX6O95475 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX6O95475 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX6O95475 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX6O95475 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX6O95475 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
SIX6O95475 AC020907.5-201ENST00000624372 1936 ntBASIC17.49■□□□□ 0.39
SIX6O95475 AC116562.4-201ENST00000641316 2276 ntBASIC17.49■□□□□ 0.39
SIX6O95475 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX6O95475 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms