Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
URB1O60287 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.82■□□□□ 0.76
URB1O60287 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.82■□□□□ 0.76
URB1O60287 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
URB1O60287 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.82■□□□□ 0.76
URB1O60287 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.82■□□□□ 0.76
URB1O60287 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
URB1O60287 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.82■□□□□ 0.76
URB1O60287 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
URB1O60287 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
URB1O60287 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
URB1O60287 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
URB1O60287 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
URB1O60287 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
URB1O60287 PNMA6B-201ENST00000538162 1200 ntBASIC19.81■□□□□ 0.76
URB1O60287 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
URB1O60287 AL034346.1-201ENST00000568244 1277 ntBASIC19.81■□□□□ 0.76
URB1O60287 AC233263.1-201ENST00000578059 224 ntBASIC19.81■□□□□ 0.76
URB1O60287 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
URB1O60287 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
URB1O60287 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
URB1O60287 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
URB1O60287 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
URB1O60287 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.81■□□□□ 0.76
URB1O60287 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
URB1O60287 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
URB1O60287 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
URB1O60287 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.81■□□□□ 0.76
URB1O60287 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.81■□□□□ 0.76
URB1O60287 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.81■□□□□ 0.76
URB1O60287 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.81■□□□□ 0.76
URB1O60287 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
URB1O60287 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.81■□□□□ 0.76
URB1O60287 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
URB1O60287 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
URB1O60287 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
URB1O60287 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
URB1O60287 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
URB1O60287 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
URB1O60287 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.8■□□□□ 0.76
URB1O60287 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.8■□□□□ 0.76
URB1O60287 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
URB1O60287 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
URB1O60287 AC053503.5-201ENST00000601508 636 ntBASIC19.8■□□□□ 0.76
URB1O60287 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
URB1O60287 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.8■□□□□ 0.76
URB1O60287 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.8■□□□□ 0.76
URB1O60287 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
URB1O60287 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.79■□□□□ 0.76
URB1O60287 RN7SL850P-201ENST00000579959 291 ntBASIC19.79■□□□□ 0.76
URB1O60287 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
URB1O60287 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
URB1O60287 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
URB1O60287 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
URB1O60287 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
URB1O60287 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.79■□□□□ 0.76
URB1O60287 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
URB1O60287 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
URB1O60287 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.79■□□□□ 0.76
URB1O60287 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.79■□□□□ 0.76
URB1O60287 AC012306.2-201ENST00000609350 630 ntBASIC19.79■□□□□ 0.76
URB1O60287 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
URB1O60287 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
URB1O60287 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
URB1O60287 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.78■□□□□ 0.76
URB1O60287 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
URB1O60287 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
URB1O60287 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
URB1O60287 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.78■□□□□ 0.76
URB1O60287 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.78■□□□□ 0.76
URB1O60287 AL049637.2-201ENST00000641778 930 ntBASIC19.78■□□□□ 0.76
URB1O60287 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
URB1O60287 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
URB1O60287 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
URB1O60287 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
URB1O60287 LINC01960-201ENST00000563759 1884 ntBASIC19.78■□□□□ 0.76
URB1O60287 AL139125.2-201ENST00000623134 1869 ntBASIC19.78■□□□□ 0.76
URB1O60287 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.78■□□□□ 0.76
URB1O60287 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.78■□□□□ 0.76
URB1O60287 RN7SL471P-201ENST00000580476 299 ntBASIC19.78■□□□□ 0.76
URB1O60287 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
URB1O60287 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
URB1O60287 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
URB1O60287 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.77■□□□□ 0.76
URB1O60287 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
URB1O60287 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.77■□□□□ 0.76
URB1O60287 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
URB1O60287 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
URB1O60287 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
URB1O60287 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms