Protein–RNA interactions for Protein: O43583

DENR, Density-regulated protein, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENRO43583 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DENRO43583 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.43■□□□□ 0.7
DENRO43583 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DENRO43583 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
DENRO43583 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DENRO43583 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
DENRO43583 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
DENRO43583 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENRO43583 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DENRO43583 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENRO43583 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENRO43583 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENRO43583 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.42■□□□□ 0.7
DENRO43583 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.42■□□□□ 0.7
DENRO43583 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENRO43583 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DENRO43583 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.42■□□□□ 0.7
DENRO43583 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.42■□□□□ 0.7
DENRO43583 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
DENRO43583 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENRO43583 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENRO43583 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.42■□□□□ 0.7
DENRO43583 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.42■□□□□ 0.7
DENRO43583 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
DENRO43583 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.41■□□□□ 0.7
DENRO43583 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DENRO43583 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENRO43583 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.41■□□□□ 0.7
DENRO43583 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENRO43583 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENRO43583 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENRO43583 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DENRO43583 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.41■□□□□ 0.7
DENRO43583 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENRO43583 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DENRO43583 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DENRO43583 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
DENRO43583 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
DENRO43583 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.4■□□□□ 0.7
DENRO43583 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.4■□□□□ 0.7
DENRO43583 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.4■□□□□ 0.7
DENRO43583 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENRO43583 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENRO43583 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
DENRO43583 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DENRO43583 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENRO43583 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENRO43583 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DENRO43583 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENRO43583 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENRO43583 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENRO43583 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
DENRO43583 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DENRO43583 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DENRO43583 MIR4281-201ENST00000580852 62 ntBASIC19.39■□□□□ 0.69
DENRO43583 AC019171.1-201ENST00000601251 1056 ntBASIC19.39■□□□□ 0.69
DENRO43583 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DENRO43583 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DENRO43583 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.39■□□□□ 0.69
DENRO43583 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DENRO43583 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
DENRO43583 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
DENRO43583 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.39■□□□□ 0.69
DENRO43583 AC121338.2-201ENST00000622535 1744 ntBASIC19.39■□□□□ 0.69
DENRO43583 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.39■□□□□ 0.69
DENRO43583 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DENRO43583 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DENRO43583 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.39■□□□□ 0.69
DENRO43583 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
DENRO43583 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
DENRO43583 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DENRO43583 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DENRO43583 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DENRO43583 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DENRO43583 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DENRO43583 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DENRO43583 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DENRO43583 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DENRO43583 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.38■□□□□ 0.69
DENRO43583 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.38■□□□□ 0.69
DENRO43583 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
DENRO43583 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DENRO43583 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DENRO43583 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
DENRO43583 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DENRO43583 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
DENRO43583 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
DENRO43583 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DENRO43583 DUX4L9-201ENST00000449051 1259 ntBASIC19.37■□□□□ 0.69
DENRO43583 THA1P-201ENST00000590384 1145 ntBASIC19.37■□□□□ 0.69
DENRO43583 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DENRO43583 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DENRO43583 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DENRO43583 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.37■□□□□ 0.69
DENRO43583 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.37■□□□□ 0.69
DENRO43583 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
DENRO43583 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DENRO43583 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DENRO43583 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DENRO43583 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms