Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RIPK2O43353 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK2O43353 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.3■■□□□ 1
RIPK2O43353 AC121338.2-201ENST00000622535 1744 ntBASIC21.3■■□□□ 1
RIPK2O43353 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.3■■□□□ 1
RIPK2O43353 AC020907.5-201ENST00000624372 1936 ntBASIC21.3■■□□□ 1
RIPK2O43353 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK2O43353 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
RIPK2O43353 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RIPK2O43353 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RIPK2O43353 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK2O43353 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.3■■□□□ 1
RIPK2O43353 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK2O43353 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.29■■□□□ 1
RIPK2O43353 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RIPK2O43353 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK2O43353 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK2O43353 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.29■■□□□ 1
RIPK2O43353 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK2O43353 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RIPK2O43353 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK2O43353 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RIPK2O43353 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK2O43353 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK2O43353 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.29■■□□□ 1
RIPK2O43353 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.29■■□□□ 1
RIPK2O43353 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK2O43353 AC007225.1-201ENST00000566331 1836 ntBASIC21.29■■□□□ 1
RIPK2O43353 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.29■■□□□ 1
RIPK2O43353 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.28■■□□□ 1
RIPK2O43353 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.28■■□□□ 1
RIPK2O43353 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.28■■□□□ 1
RIPK2O43353 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.28■■□□□ 1
RIPK2O43353 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RIPK2O43353 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RIPK2O43353 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RIPK2O43353 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.28■■□□□ 1
RIPK2O43353 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
RIPK2O43353 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.28■■□□□ 1
RIPK2O43353 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RIPK2O43353 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RIPK2O43353 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RIPK2O43353 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RIPK2O43353 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RIPK2O43353 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.27■■□□□ 1
RIPK2O43353 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RIPK2O43353 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RIPK2O43353 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.27■■□□□ 1
RIPK2O43353 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RIPK2O43353 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.27■■□□□ 1
RIPK2O43353 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.27■■□□□ 1
RIPK2O43353 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.27■■□□□ 1
RIPK2O43353 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.27■■□□□ 1
RIPK2O43353 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RIPK2O43353 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.27■■□□□ 1
RIPK2O43353 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.27■■□□□ 1
RIPK2O43353 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.27■■□□□ 1
RIPK2O43353 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.27■■□□□ 1
RIPK2O43353 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RIPK2O43353 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RIPK2O43353 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RIPK2O43353 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
RIPK2O43353 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.27■□□□□ 0.99
RIPK2O43353 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.26■□□□□ 0.99
RIPK2O43353 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.26■□□□□ 0.99
RIPK2O43353 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RIPK2O43353 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
RIPK2O43353 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK2O43353 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RIPK2O43353 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK2O43353 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK2O43353 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK2O43353 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK2O43353 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RIPK2O43353 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RIPK2O43353 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RIPK2O43353 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.25■□□□□ 0.99
RIPK2O43353 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RIPK2O43353 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.25■□□□□ 0.99
RIPK2O43353 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RIPK2O43353 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK2O43353 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK2O43353 RARRES2P1-201ENST00000474487 481 ntBASIC21.25■□□□□ 0.99
RIPK2O43353 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.25■□□□□ 0.99
RIPK2O43353 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.25■□□□□ 0.99
RIPK2O43353 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK2O43353 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RIPK2O43353 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK2O43353 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.25■□□□□ 0.99
RIPK2O43353 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK2O43353 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK2O43353 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.24■□□□□ 0.99
RIPK2O43353 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
RIPK2O43353 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK2O43353 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK2O43353 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK2O43353 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK2O43353 AP005435.1-201ENST00000529293 1178 ntBASIC21.24■□□□□ 0.99
RIPK2O43353 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.24■□□□□ 0.99
RIPK2O43353 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms