Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COPEO14579 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.93■□□□□ 0.94
COPEO14579 AC073314.1-201ENST00000568729 2216 ntBASIC20.93■□□□□ 0.94
COPEO14579 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
COPEO14579 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.93■□□□□ 0.94
COPEO14579 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.92■□□□□ 0.94
COPEO14579 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COPEO14579 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COPEO14579 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COPEO14579 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
COPEO14579 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COPEO14579 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COPEO14579 AP005435.1-201ENST00000529293 1178 ntBASIC20.92■□□□□ 0.94
COPEO14579 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COPEO14579 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
COPEO14579 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.92■□□□□ 0.94
COPEO14579 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COPEO14579 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.92■□□□□ 0.94
COPEO14579 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COPEO14579 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.92■□□□□ 0.94
COPEO14579 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COPEO14579 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
COPEO14579 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COPEO14579 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COPEO14579 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COPEO14579 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
COPEO14579 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COPEO14579 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
COPEO14579 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COPEO14579 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
COPEO14579 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COPEO14579 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COPEO14579 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
COPEO14579 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COPEO14579 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COPEO14579 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
COPEO14579 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COPEO14579 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPEO14579 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.9■□□□□ 0.94
COPEO14579 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPEO14579 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPEO14579 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
COPEO14579 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPEO14579 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPEO14579 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.9■□□□□ 0.94
COPEO14579 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
COPEO14579 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPEO14579 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPEO14579 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPEO14579 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPEO14579 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPEO14579 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.9■□□□□ 0.94
COPEO14579 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.9■□□□□ 0.94
COPEO14579 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
COPEO14579 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
COPEO14579 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COPEO14579 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPEO14579 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPEO14579 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
COPEO14579 AL138724.1-201ENST00000606771 1088 ntBASIC20.89■□□□□ 0.93
COPEO14579 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPEO14579 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.89■□□□□ 0.93
COPEO14579 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPEO14579 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPEO14579 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.89■□□□□ 0.93
COPEO14579 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COPEO14579 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPEO14579 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COPEO14579 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.88■□□□□ 0.93
COPEO14579 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COPEO14579 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
COPEO14579 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPEO14579 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPEO14579 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPEO14579 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPEO14579 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.88■□□□□ 0.93
COPEO14579 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.88■□□□□ 0.93
COPEO14579 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.88■□□□□ 0.93
COPEO14579 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.88■□□□□ 0.93
COPEO14579 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
COPEO14579 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPEO14579 SYT6-210ENST00000641643 1587 ntBASIC20.88■□□□□ 0.93
COPEO14579 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPEO14579 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPEO14579 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPEO14579 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPEO14579 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPEO14579 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
COPEO14579 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.87■□□□□ 0.93
COPEO14579 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPEO14579 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPEO14579 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPEO14579 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.87■□□□□ 0.93
COPEO14579 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.87■□□□□ 0.93
COPEO14579 SERBP1P1-201ENST00000396021 1160 ntBASIC20.87■□□□□ 0.93
COPEO14579 SLC47A1P1-202ENST00000449666 945 ntBASIC20.87■□□□□ 0.93
COPEO14579 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.87■□□□□ 0.93
COPEO14579 AL512631.2-201ENST00000604634 923 ntBASIC20.87■□□□□ 0.93
COPEO14579 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.87■□□□□ 0.93
COPEO14579 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms