Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCRL2O00421 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.81■□□□□ 0.6
CCRL2O00421 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCRL2O00421 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCRL2O00421 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCRL2O00421 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCRL2O00421 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCRL2O00421 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.8■□□□□ 0.6
CCRL2O00421 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCRL2O00421 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCRL2O00421 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCRL2O00421 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.8■□□□□ 0.6
CCRL2O00421 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCRL2O00421 AC009102.2-201ENST00000606772 1639 ntBASIC18.8■□□□□ 0.6
CCRL2O00421 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCRL2O00421 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.8■□□□□ 0.6
CCRL2O00421 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCRL2O00421 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCRL2O00421 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCRL2O00421 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCRL2O00421 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.79■□□□□ 0.6
CCRL2O00421 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCRL2O00421 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCRL2O00421 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCRL2O00421 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCRL2O00421 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.79■□□□□ 0.6
CCRL2O00421 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCRL2O00421 AL499627.2-201ENST00000606283 725 ntBASIC18.79■□□□□ 0.6
CCRL2O00421 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.79■□□□□ 0.6
CCRL2O00421 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.79■□□□□ 0.6
CCRL2O00421 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCRL2O00421 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCRL2O00421 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCRL2O00421 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCRL2O00421 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 AC103724.3-201ENST00000564481 992 ntBASIC18.78■□□□□ 0.6
CCRL2O00421 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCRL2O00421 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.78■□□□□ 0.6
CCRL2O00421 PLK5-205ENST00000642079 1969 ntBASIC18.78■□□□□ 0.6
CCRL2O00421 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.78■□□□□ 0.6
CCRL2O00421 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.78■□□□□ 0.6
CCRL2O00421 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCRL2O00421 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCRL2O00421 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCRL2O00421 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCRL2O00421 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.77■□□□□ 0.6
CCRL2O00421 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.77■□□□□ 0.6
CCRL2O00421 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.77■□□□□ 0.6
CCRL2O00421 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCRL2O00421 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCRL2O00421 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCRL2O00421 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.77■□□□□ 0.59
CCRL2O00421 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCRL2O00421 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCRL2O00421 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CCRL2O00421 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.76■□□□□ 0.59
CCRL2O00421 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCRL2O00421 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCRL2O00421 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCRL2O00421 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.76■□□□□ 0.59
CCRL2O00421 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCRL2O00421 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCRL2O00421 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCRL2O00421 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.76■□□□□ 0.59
CCRL2O00421 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCRL2O00421 AL031848.2-201ENST00000607670 837 ntBASIC18.76■□□□□ 0.59
CCRL2O00421 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCRL2O00421 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCRL2O00421 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCRL2O00421 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCRL2O00421 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.76■□□□□ 0.59
CCRL2O00421 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.76■□□□□ 0.59
CCRL2O00421 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCRL2O00421 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCRL2O00421 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCRL2O00421 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCRL2O00421 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.75■□□□□ 0.59
CCRL2O00421 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.75■□□□□ 0.59
CCRL2O00421 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCRL2O00421 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCRL2O00421 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCRL2O00421 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCRL2O00421 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCRL2O00421 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.75■□□□□ 0.59
CCRL2O00421 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.75■□□□□ 0.59
CCRL2O00421 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.75■□□□□ 0.59
CCRL2O00421 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.75■□□□□ 0.59
CCRL2O00421 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCRL2O00421 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.75■□□□□ 0.59
CCRL2O00421 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms