Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.61■■□□□ 1.21
LRRC53A6NM62 AC106739.1-201ENST00000617035 715 ntBASIC22.61■■□□□ 1.21
LRRC53A6NM62 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC53A6NM62 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.61■■□□□ 1.21
LRRC53A6NM62 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC53A6NM62 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.61■■□□□ 1.21
LRRC53A6NM62 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC53A6NM62 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.61■■□□□ 1.21
LRRC53A6NM62 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRC53A6NM62 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.6■■□□□ 1.21
LRRC53A6NM62 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRC53A6NM62 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
LRRC53A6NM62 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.6■■□□□ 1.21
LRRC53A6NM62 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.6■■□□□ 1.21
LRRC53A6NM62 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
LRRC53A6NM62 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.6■■□□□ 1.21
LRRC53A6NM62 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.6■■□□□ 1.21
LRRC53A6NM62 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRC53A6NM62 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC53A6NM62 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.59■■□□□ 1.21
LRRC53A6NM62 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC53A6NM62 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.59■■□□□ 1.21
LRRC53A6NM62 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.59■■□□□ 1.21
LRRC53A6NM62 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC53A6NM62 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
LRRC53A6NM62 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.59■■□□□ 1.21
LRRC53A6NM62 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.59■■□□□ 1.21
LRRC53A6NM62 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
LRRC53A6NM62 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.59■■□□□ 1.21
LRRC53A6NM62 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC53A6NM62 AC092667.1-201ENST00000434301 2586 ntBASIC22.59■■□□□ 1.21
LRRC53A6NM62 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC53A6NM62 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC53A6NM62 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC53A6NM62 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
LRRC53A6NM62 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
LRRC53A6NM62 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
LRRC53A6NM62 BX005040.4-201ENST00000637145 1518 ntBASIC22.58■■□□□ 1.21
LRRC53A6NM62 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRRC53A6NM62 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRRC53A6NM62 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.58■■□□□ 1.21
LRRC53A6NM62 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LRRC53A6NM62 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.58■■□□□ 1.21
LRRC53A6NM62 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LRRC53A6NM62 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
LRRC53A6NM62 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.58■■□□□ 1.2
LRRC53A6NM62 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.58■■□□□ 1.2
LRRC53A6NM62 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.58■■□□□ 1.2
LRRC53A6NM62 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
LRRC53A6NM62 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
LRRC53A6NM62 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRC53A6NM62 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LRRC53A6NM62 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRC53A6NM62 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
LRRC53A6NM62 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.57■■□□□ 1.2
LRRC53A6NM62 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRC53A6NM62 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRC53A6NM62 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRC53A6NM62 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
LRRC53A6NM62 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.57■■□□□ 1.2
LRRC53A6NM62 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
LRRC53A6NM62 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 EDA-201ENST00000338901 1233 ntBASIC22.56■■□□□ 1.2
LRRC53A6NM62 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.56■■□□□ 1.2
LRRC53A6NM62 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRC53A6NM62 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRC53A6NM62 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LRRC53A6NM62 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LRRC53A6NM62 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC53A6NM62 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
LRRC53A6NM62 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.55■■□□□ 1.2
LRRC53A6NM62 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
LRRC53A6NM62 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRC53A6NM62 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRC53A6NM62 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRC53A6NM62 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRC53A6NM62 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LRRC53A6NM62 MIR572-201ENST00000384983 95 ntBASIC22.55■■□□□ 1.2
LRRC53A6NM62 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.55■■□□□ 1.2
LRRC53A6NM62 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRC53A6NM62 AC110285.6-201ENST00000617652 491 ntBASIC22.55■■□□□ 1.2
LRRC53A6NM62 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRC53A6NM62 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRC53A6NM62 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRC53A6NM62 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LRRC53A6NM62 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRC53A6NM62 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRC53A6NM62 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
LRRC53A6NM62 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms