Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 AC121338.2-201ENST00000622535 1744 ntBASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 AC020907.5-201ENST00000624372 1936 ntBASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUXBA0A1W2PPF3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.08■□□□□ 0.33
DUXBA0A1W2PPF3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
DUXBA0A1W2PPF3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
DUXBA0A1W2PPF3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.08■□□□□ 0.33
DUXBA0A1W2PPF3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
DUXBA0A1W2PPF3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
DUXBA0A1W2PPF3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.08■□□□□ 0.33
DUXBA0A1W2PPF3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUXBA0A1W2PPF3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 AC027702.1-201ENST00000563810 1770 ntBASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUXBA0A1W2PPF3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 AC007225.1-201ENST00000566331 1836 ntBASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 TSPY9P-201ENST00000440215 945 ntBASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 TSPY11P-201ENST00000442607 1045 ntBASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 MIR3181-201ENST00000578512 73 ntBASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 AC099791.2-201ENST00000605725 427 ntBASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 AC092171.4-201ENST00000609130 632 ntBASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DUXBA0A1W2PPF3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUXBA0A1W2PPF3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
DUXBA0A1W2PPF3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DUXBA0A1W2PPF3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUXBA0A1W2PPF3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
DUXBA0A1W2PPF3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUXBA0A1W2PPF3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.05■□□□□ 0.32
DUXBA0A1W2PPF3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUXBA0A1W2PPF3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms