Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC196A0A1B0GTZ2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC196A0A1B0GTZ2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC196A0A1B0GTZ2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC196A0A1B0GTZ2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC196A0A1B0GTZ2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.41■■□□□ 1.5
CCDC196A0A1B0GTZ2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CCDC196A0A1B0GTZ2 KRT16P2-201ENST00000414673 1423 ntBASIC24.41■■□□□ 1.5
CCDC196A0A1B0GTZ2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC196A0A1B0GTZ2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC196A0A1B0GTZ2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC196A0A1B0GTZ2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 KRT18P61-201ENST00000585825 1298 ntBASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 AL024507.2-201ENST00000606070 2574 ntBASIC24.4■■□□□ 1.5
CCDC196A0A1B0GTZ2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC196A0A1B0GTZ2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC196A0A1B0GTZ2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CCDC196A0A1B0GTZ2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.39■■□□□ 1.5
CCDC196A0A1B0GTZ2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CCDC196A0A1B0GTZ2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 KRT18P5-201ENST00000436075 1291 ntBASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC196A0A1B0GTZ2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 MIR935-201ENST00000401179 91 ntBASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC196A0A1B0GTZ2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC196A0A1B0GTZ2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC196A0A1B0GTZ2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC196A0A1B0GTZ2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC196A0A1B0GTZ2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CCDC196A0A1B0GTZ2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC196A0A1B0GTZ2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CCDC196A0A1B0GTZ2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC196A0A1B0GTZ2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.35■■□□□ 1.49
CCDC196A0A1B0GTZ2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.35■■□□□ 1.49
CCDC196A0A1B0GTZ2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.35■■□□□ 1.49
CCDC196A0A1B0GTZ2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.35■■□□□ 1.49
CCDC196A0A1B0GTZ2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.35■■□□□ 1.49
CCDC196A0A1B0GTZ2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC196A0A1B0GTZ2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC196A0A1B0GTZ2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC196A0A1B0GTZ2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.34■■□□□ 1.49
CCDC196A0A1B0GTZ2 AL049796.1-201ENST00000565336 1766 ntBASIC24.34■■□□□ 1.49
CCDC196A0A1B0GTZ2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.34■■□□□ 1.49
CCDC196A0A1B0GTZ2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms