Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF103-CHMP3A0A140T963 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF103-CHMP3A0A140T963 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF103-CHMP3A0A140T963 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF103-CHMP3A0A140T963 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF103-CHMP3A0A140T963 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF103-CHMP3A0A140T963 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF103-CHMP3A0A140T963 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF103-CHMP3A0A140T963 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF103-CHMP3A0A140T963 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 MIR4767-201ENST00000582827 78 ntBASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF103-CHMP3A0A140T963 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 UNC93B3-201ENST00000308076 687 ntBASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF103-CHMP3A0A140T963 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF103-CHMP3A0A140T963 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF103-CHMP3A0A140T963 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF103-CHMP3A0A140T963 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF103-CHMP3A0A140T963 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF103-CHMP3A0A140T963 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF103-CHMP3A0A140T963 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF103-CHMP3A0A140T963 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
RNF103-CHMP3A0A140T963 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.08■□□□□ 0.8
RNF103-CHMP3A0A140T963 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.08■□□□□ 0.8
RNF103-CHMP3A0A140T963 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 AP004607.7-201ENST00000527152 1677 ntBASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF103-CHMP3A0A140T963 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF103-CHMP3A0A140T963 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms