Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 AC104187.1-201ENST00000607510 612 ntBASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 LINC01960-201ENST00000563759 1884 ntBASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV20A0A0B4J274 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAV20A0A0B4J274 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV20A0A0B4J274 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 AL034346.1-201ENST00000568244 1277 ntBASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV20A0A0B4J274 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV20A0A0B4J274 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms