Protein–RNA interactions for Protein: Q9Y221

NIP7, 60S ribosome subunit biogenesis protein NIP7 homolog, humanhuman

Known RBP eCLIP

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7Q9Y221 POR-222ENST00000493973 1028 ntTSL 222.64■■□□□ 1.213e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-223ENST00000532370 693 ntTSL 222.63■■□□□ 1.213e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-229ENST00000533572 975 ntTSL 322.16■■□□□ 1.143e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-210ENST00000526195 560 ntTSL 421.02■□□□□ 0.963e-7■■■■□ 21.9
NIP7Q9Y221 LRP10-202ENST00000470660 486 ntTSL 320.82■□□□□ 0.923e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-208ENST00000525076 550 ntTSL 520.18■□□□□ 0.823e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-230ENST00000534149 524 ntTSL 420■□□□□ 0.793e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-221ENST00000531502 557 ntTSL 419.21■□□□□ 0.673e-7■■■■□ 21.9
NIP7Q9Y221 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.553e-7■■■■□ 21.9
NIP7Q9Y221 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.493e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-217ENST00000530296 561 ntTSL 418■□□□□ 0.473e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-209ENST00000525315 586 ntTSL 216.74■□□□□ 0.273e-7■■■■□ 21.9
NIP7Q9Y221 LRP10-204ENST00000551466 2566 ntAPPRIS ALT2 TSL 1 (best)15.9■□□□□ 0.143e-7■■■■□ 21.9
NIP7Q9Y221 VTN-202ENST00000539746 609 ntTSL 214.57□□□□□ -0.083e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-212ENST00000526645 559 ntTSL 414.55□□□□□ -0.083e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-214ENST00000527243 580 ntTSL 414.53□□□□□ -0.083e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-205ENST00000505496 540 ntTSL 411.27□□□□□ -0.613e-7■■■■□ 21.9
NIP7Q9Y221 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC15.08■□□□□ 06e-66■■■■□ 21.3
NIP7Q9Y221 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.366e-66■■■■□ 21.3
NIP7Q9Y221 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.245e-10■■■■□ 21.3
NIP7Q9Y221 DHCR24-202ENST00000436604 863 ntTSL 313.36□□□□□ -0.275e-10■■■■□ 21.3
NIP7Q9Y221 CWF19L1-204ENST00000468709 2402 ntTSL 212.06□□□□□ -0.485e-10■■■■□ 21.3
NIP7Q9Y221 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC12.02□□□□□ -0.485e-10■■■■□ 21.3
NIP7Q9Y221 CWF19L1-206ENST00000478047 2694 ntTSL 210.86□□□□□ -0.675e-10■■■■□ 21.3
NIP7Q9Y221 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.915e-10■■■■□ 21.3
NIP7Q9Y221 CWF19L1-207ENST00000482452 1606 ntTSL 58.08□□□□□ -1.125e-10■■■■□ 21.3
NIP7Q9Y221 LRRC75A-AS1-228ENST00000584141 564 ntTSL 224.17■■□□□ 1.463e-15■■■■□ 21.3
NIP7Q9Y221 LRRC75A-AS1-219ENST00000578757 920 ntTSL 1 (best)17■□□□□ 0.313e-15■■■■□ 21.3
NIP7Q9Y221 CTSB-222ENST00000531551 1855 ntTSL 1 (best)22.32■■□□□ 1.161e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.011e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.861e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.851e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.811e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.791e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.71e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.571e-6■■■■□ 21.2
NIP7Q9Y221 IGFBP3-208ENST00000460477 574 ntTSL 222.52■■□□□ 1.27e-7■■■■□ 21
NIP7Q9Y221 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.312e-7■■■■□ 21
NIP7Q9Y221 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.662e-14■■■■□ 21
NIP7Q9Y221 NCAPD2-207ENST00000539084 4290 ntTSL 213.2□□□□□ -0.32e-14■■■■□ 21
NIP7Q9Y221 NCAPD2-202ENST00000382457 2844 ntTSL 512.51□□□□□ -0.412e-14■■■■□ 21
NIP7Q9Y221 NCAPD2-210ENST00000541399 584 ntTSL 58.61□□□□□ -1.032e-14■■■■□ 21
NIP7Q9Y221 NCAPD2-208ENST00000539714 533 ntTSL 38.51□□□□□ -1.052e-14■■■■□ 21
NIP7Q9Y221 SCARNA10-201ENST00000459255 330 ntBASIC5.83□□□□□ -1.482e-14■■■■□ 21
NIP7Q9Y221 AC006064.5-201ENST00000541782 248 ntBASIC5.3□□□□□ -1.562e-14■■■■□ 21
NIP7Q9Y221 GAS5-225ENST00000454813 621 ntTSL 37.62□□□□□ -1.191e-323■■■■□ 21
NIP7Q9Y221 GAS5-217ENST00000444470 424 ntTSL 27.32□□□□□ -1.241e-323■■■■□ 21
NIP7Q9Y221 GAS5-207ENST00000422207 643 ntTSL 27.32□□□□□ -1.241e-323■■■■□ 21
NIP7Q9Y221 GAS5-212ENST00000434796 575 ntTSL 21.55□□□□□ -2.161e-323■■■■□ 21
NIP7Q9Y221 SNORD12C-201ENST00000386307 89 ntBASIC0.65□□□□□ -2.311e-323■■■■□ 21
NIP7Q9Y221 UBAP2-206ENST00000412543 1349 ntTSL 59.84□□□□□ -0.831e-21■■■■□ 20.6
NIP7Q9Y221 UBAP2-207ENST00000421278 833 ntTSL 56.37□□□□□ -1.391e-21■■■■□ 20.6
NIP7Q9Y221 CTSB-225ENST00000532409 839 ntTSL 220.23■□□□□ 0.832e-6■■■■□ 20.4
NIP7Q9Y221 CTSB-203ENST00000420692 2230 ntTSL 218.96■□□□□ 0.632e-6■■■■□ 20.4
NIP7Q9Y221 CTSB-218ENST00000530624 430 ntTSL 518.75■□□□□ 0.592e-6■■■■□ 20.4
NIP7Q9Y221 CTSB-216ENST00000530290 498 ntTSL 37.53□□□□□ -1.22e-6■■■■□ 20.4
NIP7Q9Y221 SLC39A4-204ENST00000527148 684 ntTSL 227.09■■□□□ 1.931e-6■■■■□ 20.2
NIP7Q9Y221 SLC39A4-207ENST00000531013 795 ntTSL 224.57■■□□□ 1.521e-6■■■■□ 20.2
NIP7Q9Y221 SLC39A4-206ENST00000530807 498 ntTSL 220.82■□□□□ 0.921e-6■■■■□ 20.2
NIP7Q9Y221 SLC39A4-209ENST00000532718 668 ntTSL 1 (best)20.16■□□□□ 0.821e-6■■■■□ 20.2
NIP7Q9Y221 SLC39A4-205ENST00000529462 2778 ntTSL 218.35■□□□□ 0.531e-6■■■■□ 20.2
NIP7Q9Y221 SLC39A4-208ENST00000531789 361 ntTSL 316.95■□□□□ 0.31e-6■■■■□ 20.2
NIP7Q9Y221 VTN-203ENST00000542029 501 ntTSL 314.98□□□□□ -0.013e-12■■■■□ 20.2
NIP7Q9Y221 MIR3609-201ENST00000582661 80 ntBASIC2.94□□□□□ -1.941e-17■■■■□ 20.1
NIP7Q9Y221 SLCO5A1-204ENST00000526750 2650 ntTSL 523.27■■□□□ 1.322e-12■■■■□ 19.9
NIP7Q9Y221 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.72■□□□□ 0.752e-12■■■■□ 19.9
NIP7Q9Y221 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.82■□□□□ 0.442e-12■■■■□ 19.9
NIP7Q9Y221 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.32e-12■■■■□ 19.9
NIP7Q9Y221 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.99■■■□□ 2.073e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.53■■□□□ 1.683e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.84■■□□□ 1.573e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-224ENST00000581718 574 ntTSL 224.82■■□□□ 1.563e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-203ENST00000472367 794 ntTSL 323.38■■□□□ 1.333e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-212ENST00000483588 688 ntTSL 322.32■■□□□ 1.163e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-229ENST00000584177 574 ntTSL 421.82■■□□□ 1.083e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.42■□□□□ 0.543e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.42■□□□□ 0.543e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.68■□□□□ 0.423e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.55■□□□□ 0.43e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-215ENST00000491009 863 ntTSL 217.1■□□□□ 0.333e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-206ENST00000477249 891 ntTSL 517■□□□□ 0.313e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-217ENST00000497774 1662 ntTSL 516.57■□□□□ 0.243e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC16.07■□□□□ 0.163e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-207ENST00000478103 712 ntTSL 313.71□□□□□ -0.213e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-201ENST00000460249 773 ntTSL 313.2□□□□□ -0.33e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-222ENST00000580770 572 ntTSL 413.2□□□□□ -0.33e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-204ENST00000475947 598 ntTSL 213.2□□□□□ -0.33e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-227ENST00000583400 712 ntTSL 413.12□□□□□ -0.313e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC12.88□□□□□ -0.353e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-221ENST00000580180 753 ntTSL 211.95□□□□□ -0.53e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC10.59□□□□□ -0.713e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)10.09□□□□□ -0.793e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-230ENST00000584926 604 ntTSL 510.09□□□□□ -0.793e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-216ENST00000492250 565 ntTSL 56.21□□□□□ -1.423e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-211ENST00000483140 936 ntTSL 25.11□□□□□ -1.593e-15■■■■□ 19.6
NIP7Q9Y221 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.71□□□□□ -1.182e-35■■■□□ 19.1
NIP7Q9Y221 SCARNA9-201ENST00000530422 353 ntBASIC7.7□□□□□ -1.184e-24■■■□□ 19
NIP7Q9Y221 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.414e-24■■■□□ 19
NIP7Q9Y221 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.64e-24■■■□□ 19
NIP7Q9Y221 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 43.27□□□□□ -1.894e-24■■■□□ 19
Retrieved 100 of 1,619 protein–RNA pairs in 15.2 ms