Protein–RNA interactions for Protein: Q9Y221

NIP7, 60S ribosome subunit biogenesis protein NIP7 homolog, humanhuman

Known RBP eCLIP

Length 180 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7Q9Y221 POR-222ENST00000493973 1028 ntTSL 222.64■■□□□ 1.213e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-223ENST00000532370 693 ntTSL 222.63■■□□□ 1.213e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-229ENST00000533572 975 ntTSL 322.16■■□□□ 1.143e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-210ENST00000526195 560 ntTSL 421.02■□□□□ 0.963e-7■■■■□ 21.9
NIP7Q9Y221 LRP10-202ENST00000470660 486 ntTSL 320.82■□□□□ 0.923e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-208ENST00000525076 550 ntTSL 520.18■□□□□ 0.823e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-230ENST00000534149 524 ntTSL 420■□□□□ 0.793e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-221ENST00000531502 557 ntTSL 419.21■□□□□ 0.673e-7■■■■□ 21.9
NIP7Q9Y221 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.553e-7■■■■□ 21.9
NIP7Q9Y221 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.493e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-217ENST00000530296 561 ntTSL 418■□□□□ 0.473e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-209ENST00000525315 586 ntTSL 216.74■□□□□ 0.273e-7■■■■□ 21.9
NIP7Q9Y221 LRP10-204ENST00000551466 2566 ntAPPRIS ALT2 TSL 1 (best)15.9■□□□□ 0.143e-7■■■■□ 21.9
NIP7Q9Y221 VTN-202ENST00000539746 609 ntTSL 214.57□□□□□ -0.083e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-212ENST00000526645 559 ntTSL 414.55□□□□□ -0.083e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-214ENST00000527243 580 ntTSL 414.53□□□□□ -0.083e-7■■■■□ 21.9
NIP7Q9Y221 CTSB-205ENST00000505496 540 ntTSL 411.27□□□□□ -0.613e-7■■■■□ 21.9
NIP7Q9Y221 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC15.08■□□□□ 06e-66■■■■□ 21.3
NIP7Q9Y221 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.366e-66■■■■□ 21.3
NIP7Q9Y221 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.245e-10■■■■□ 21.3
NIP7Q9Y221 DHCR24-202ENST00000436604 863 ntTSL 313.36□□□□□ -0.275e-10■■■■□ 21.3
NIP7Q9Y221 CWF19L1-204ENST00000468709 2402 ntTSL 212.06□□□□□ -0.485e-10■■■■□ 21.3
NIP7Q9Y221 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC12.02□□□□□ -0.485e-10■■■■□ 21.3
NIP7Q9Y221 CWF19L1-206ENST00000478047 2694 ntTSL 210.86□□□□□ -0.675e-10■■■■□ 21.3
NIP7Q9Y221 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.915e-10■■■■□ 21.3
NIP7Q9Y221 CWF19L1-207ENST00000482452 1606 ntTSL 58.08□□□□□ -1.125e-10■■■■□ 21.3
NIP7Q9Y221 LRRC75A-AS1-228ENST00000584141 564 ntTSL 224.17■■□□□ 1.463e-15■■■■□ 21.3
NIP7Q9Y221 LRRC75A-AS1-219ENST00000578757 920 ntTSL 1 (best)17■□□□□ 0.313e-15■■■■□ 21.3
NIP7Q9Y221 CTSB-222ENST00000531551 1855 ntTSL 1 (best)22.32■■□□□ 1.161e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.011e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.861e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.851e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.811e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.791e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.71e-6■■■■□ 21.2
NIP7Q9Y221 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.571e-6■■■■□ 21.2
NIP7Q9Y221 IGFBP3-208ENST00000460477 574 ntTSL 222.52■■□□□ 1.27e-7■■■■□ 21
NIP7Q9Y221 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.312e-7■■■■□ 21
NIP7Q9Y221 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.662e-14■■■■□ 21
NIP7Q9Y221 NCAPD2-207ENST00000539084 4290 ntTSL 213.2□□□□□ -0.32e-14■■■■□ 21
NIP7Q9Y221 NCAPD2-202ENST00000382457 2844 ntTSL 512.51□□□□□ -0.412e-14■■■■□ 21
NIP7Q9Y221 NCAPD2-210ENST00000541399 584 ntTSL 58.61□□□□□ -1.032e-14■■■■□ 21
NIP7Q9Y221 NCAPD2-208ENST00000539714 533 ntTSL 38.51□□□□□ -1.052e-14■■■■□ 21
NIP7Q9Y221 SCARNA10-201ENST00000459255 330 ntBASIC5.83□□□□□ -1.482e-14■■■■□ 21
NIP7Q9Y221 AC006064.5-201ENST00000541782 248 ntBASIC5.3□□□□□ -1.562e-14■■■■□ 21
NIP7Q9Y221 GAS5-225ENST00000454813 621 ntTSL 37.62□□□□□ -1.191e-323■■■■□ 21
NIP7Q9Y221 GAS5-217ENST00000444470 424 ntTSL 27.32□□□□□ -1.241e-323■■■■□ 21
NIP7Q9Y221 GAS5-207ENST00000422207 643 ntTSL 27.32□□□□□ -1.241e-323■■■■□ 21
NIP7Q9Y221 GAS5-212ENST00000434796 575 ntTSL 21.55□□□□□ -2.161e-323■■■■□ 21
NIP7Q9Y221 SNORD12C-201ENST00000386307 89 ntBASIC0.65□□□□□ -2.311e-323■■■■□ 21
NIP7Q9Y221 UBAP2-206ENST00000412543 1349 ntTSL 59.84□□□□□ -0.831e-21■■■■□ 20.6
NIP7Q9Y221 UBAP2-207ENST00000421278 833 ntTSL 56.37□□□□□ -1.391e-21■■■■□ 20.6
NIP7Q9Y221 CTSB-225ENST00000532409 839 ntTSL 220.23■□□□□ 0.832e-6■■■■□ 20.4
NIP7Q9Y221 CTSB-203ENST00000420692 2230 ntTSL 218.96■□□□□ 0.632e-6■■■■□ 20.4
NIP7Q9Y221 CTSB-218ENST00000530624 430 ntTSL 518.75■□□□□ 0.592e-6■■■■□ 20.4
NIP7Q9Y221 CTSB-216ENST00000530290 498 ntTSL 37.53□□□□□ -1.22e-6■■■■□ 20.4
NIP7Q9Y221 SLC39A4-204ENST00000527148 684 ntTSL 227.09■■□□□ 1.931e-6■■■■□ 20.2
NIP7Q9Y221 SLC39A4-207ENST00000531013 795 ntTSL 224.57■■□□□ 1.521e-6■■■■□ 20.2
NIP7Q9Y221 SLC39A4-206ENST00000530807 498 ntTSL 220.82■□□□□ 0.921e-6■■■■□ 20.2
NIP7Q9Y221 SLC39A4-209ENST00000532718 668 ntTSL 1 (best)20.16■□□□□ 0.821e-6■■■■□ 20.2
NIP7Q9Y221 SLC39A4-205ENST00000529462 2778 ntTSL 218.35■□□□□ 0.531e-6■■■■□ 20.2
NIP7Q9Y221 SLC39A4-208ENST00000531789 361 ntTSL 316.95■□□□□ 0.31e-6■■■■□ 20.2
NIP7Q9Y221 VTN-203ENST00000542029 501 ntTSL 314.98□□□□□ -0.013e-12■■■■□ 20.2
NIP7Q9Y221 MIR3609-201ENST00000582661 80 ntBASIC2.94□□□□□ -1.941e-17■■■■□ 20.1
NIP7Q9Y221 SLCO5A1-204ENST00000526750 2650 ntTSL 523.27■■□□□ 1.322e-12■■■■□ 19.9
NIP7Q9Y221 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.72■□□□□ 0.752e-12■■■■□ 19.9
NIP7Q9Y221 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.82■□□□□ 0.442e-12■■■■□ 19.9
NIP7Q9Y221 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.32e-12■■■■□ 19.9
NIP7Q9Y221 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.99■■■□□ 2.073e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.53■■□□□ 1.683e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.84■■□□□ 1.573e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-224ENST00000581718 574 ntTSL 224.82■■□□□ 1.563e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-203ENST00000472367 794 ntTSL 323.38■■□□□ 1.333e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-212ENST00000483588 688 ntTSL 322.32■■□□□ 1.163e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-229ENST00000584177 574 ntTSL 421.82■■□□□ 1.083e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.42■□□□□ 0.543e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.42■□□□□ 0.543e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.68■□□□□ 0.423e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.55■□□□□ 0.43e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-215ENST00000491009 863 ntTSL 217.1■□□□□ 0.333e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-206ENST00000477249 891 ntTSL 517■□□□□ 0.313e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-217ENST00000497774 1662 ntTSL 516.57■□□□□ 0.243e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC16.07■□□□□ 0.163e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-207ENST00000478103 712 ntTSL 313.71□□□□□ -0.213e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-201ENST00000460249 773 ntTSL 313.2□□□□□ -0.33e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-222ENST00000580770 572 ntTSL 413.2□□□□□ -0.33e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-204ENST00000475947 598 ntTSL 213.2□□□□□ -0.33e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-227ENST00000583400 712 ntTSL 413.12□□□□□ -0.313e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC12.88□□□□□ -0.353e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-221ENST00000580180 753 ntTSL 211.95□□□□□ -0.53e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC10.59□□□□□ -0.713e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)10.09□□□□□ -0.793e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-230ENST00000584926 604 ntTSL 510.09□□□□□ -0.793e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-216ENST00000492250 565 ntTSL 56.21□□□□□ -1.423e-15■■■■□ 19.6
NIP7Q9Y221 LRRC75A-AS1-211ENST00000483140 936 ntTSL 25.11□□□□□ -1.593e-15■■■■□ 19.6
NIP7Q9Y221 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.71□□□□□ -1.182e-35■■■□□ 19.1
NIP7Q9Y221 SCARNA9-201ENST00000530422 353 ntBASIC7.7□□□□□ -1.184e-24■■■□□ 19
NIP7Q9Y221 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.414e-24■■■□□ 19
NIP7Q9Y221 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.64e-24■■■□□ 19
NIP7Q9Y221 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 43.27□□□□□ -1.894e-24■■■□□ 19
Retrieved 100 of 1,619 protein–RNA pairs in 62.5 ms