Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
ATP6V0A4Q9HBG4 ABHD17AP4-201ENST00000411545 909 ntBASIC29.72■■■□□ 2.35
ATP6V0A4Q9HBG4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
ATP6V0A4Q9HBG4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
ATP6V0A4Q9HBG4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
ATP6V0A4Q9HBG4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
ATP6V0A4Q9HBG4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.69■■■□□ 2.34
ATP6V0A4Q9HBG4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.69■■■□□ 2.34
ATP6V0A4Q9HBG4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.68■■■□□ 2.34
ATP6V0A4Q9HBG4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.68■■■□□ 2.34
ATP6V0A4Q9HBG4 AL161658.1-201ENST00000623641 1967 ntBASIC29.68■■■□□ 2.34
ATP6V0A4Q9HBG4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
ATP6V0A4Q9HBG4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
ATP6V0A4Q9HBG4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ATP6V0A4Q9HBG4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ATP6V0A4Q9HBG4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
ATP6V0A4Q9HBG4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
ATP6V0A4Q9HBG4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.65■■■□□ 2.34
ATP6V0A4Q9HBG4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
ATP6V0A4Q9HBG4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ATP6V0A4Q9HBG4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ATP6V0A4Q9HBG4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
ATP6V0A4Q9HBG4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ATP6V0A4Q9HBG4 MIR7108-201ENST00000614319 87 ntBASIC29.63■■■□□ 2.33
ATP6V0A4Q9HBG4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ATP6V0A4Q9HBG4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ATP6V0A4Q9HBG4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
ATP6V0A4Q9HBG4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ATP6V0A4Q9HBG4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
ATP6V0A4Q9HBG4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ATP6V0A4Q9HBG4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.61■■■□□ 2.33
ATP6V0A4Q9HBG4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
ATP6V0A4Q9HBG4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.6■■■□□ 2.33
ATP6V0A4Q9HBG4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.59■■■□□ 2.33
ATP6V0A4Q9HBG4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
ATP6V0A4Q9HBG4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.58■■■□□ 2.33
ATP6V0A4Q9HBG4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
ATP6V0A4Q9HBG4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.57■■■□□ 2.32
ATP6V0A4Q9HBG4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
ATP6V0A4Q9HBG4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
ATP6V0A4Q9HBG4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ATP6V0A4Q9HBG4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ATP6V0A4Q9HBG4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
ATP6V0A4Q9HBG4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ATP6V0A4Q9HBG4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ATP6V0A4Q9HBG4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.54■■■□□ 2.32
ATP6V0A4Q9HBG4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ATP6V0A4Q9HBG4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ATP6V0A4Q9HBG4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
ATP6V0A4Q9HBG4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ATP6V0A4Q9HBG4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.53■■■□□ 2.32
ATP6V0A4Q9HBG4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
ATP6V0A4Q9HBG4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
ATP6V0A4Q9HBG4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ATP6V0A4Q9HBG4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.52■■■□□ 2.32
ATP6V0A4Q9HBG4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.52■■■□□ 2.32
ATP6V0A4Q9HBG4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
ATP6V0A4Q9HBG4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.51■■■□□ 2.31
ATP6V0A4Q9HBG4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
ATP6V0A4Q9HBG4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.51■■■□□ 2.31
ATP6V0A4Q9HBG4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ATP6V0A4Q9HBG4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ATP6V0A4Q9HBG4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.5■■■□□ 2.31
ATP6V0A4Q9HBG4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ATP6V0A4Q9HBG4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ATP6V0A4Q9HBG4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ATP6V0A4Q9HBG4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.49■■■□□ 2.31
ATP6V0A4Q9HBG4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
ATP6V0A4Q9HBG4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.48■■■□□ 2.31
ATP6V0A4Q9HBG4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.48■■■□□ 2.31
ATP6V0A4Q9HBG4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
ATP6V0A4Q9HBG4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.48■■■□□ 2.31
ATP6V0A4Q9HBG4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ATP6V0A4Q9HBG4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.47■■■□□ 2.31
ATP6V0A4Q9HBG4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.47■■■□□ 2.31
ATP6V0A4Q9HBG4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
ATP6V0A4Q9HBG4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
ATP6V0A4Q9HBG4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.46■■■□□ 2.31
ATP6V0A4Q9HBG4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ATP6V0A4Q9HBG4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.46■■■□□ 2.31
ATP6V0A4Q9HBG4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.45■■■□□ 2.31
ATP6V0A4Q9HBG4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.45■■■□□ 2.31
ATP6V0A4Q9HBG4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
ATP6V0A4Q9HBG4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ATP6V0A4Q9HBG4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.44■■■□□ 2.3
ATP6V0A4Q9HBG4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.42■■■□□ 2.3
ATP6V0A4Q9HBG4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.42■■■□□ 2.3
ATP6V0A4Q9HBG4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
ATP6V0A4Q9HBG4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.42■■■□□ 2.3
ATP6V0A4Q9HBG4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ATP6V0A4Q9HBG4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ATP6V0A4Q9HBG4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ATP6V0A4Q9HBG4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ATP6V0A4Q9HBG4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
ATP6V0A4Q9HBG4 ZNRF2P2-203ENST00000454624 420 ntBASIC29.38■■■□□ 2.29
ATP6V0A4Q9HBG4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ATP6V0A4Q9HBG4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
ATP6V0A4Q9HBG4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.35■■■□□ 2.29
ATP6V0A4Q9HBG4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
ATP6V0A4Q9HBG4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms