Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SH2D4AQ9H788 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SH2D4AQ9H788 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.35■■■□□ 2.61
SH2D4AQ9H788 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SH2D4AQ9H788 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SH2D4AQ9H788 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
SH2D4AQ9H788 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.33■■■□□ 2.61
SH2D4AQ9H788 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SH2D4AQ9H788 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SH2D4AQ9H788 AC108673.1-201ENST00000510422 1159 ntBASIC31.32■■■□□ 2.6
SH2D4AQ9H788 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SH2D4AQ9H788 DUX4L29-201ENST00000425409 679 ntBASIC31.31■■■□□ 2.6
SH2D4AQ9H788 ZNRF2P2-203ENST00000454624 420 ntBASIC31.31■■■□□ 2.6
SH2D4AQ9H788 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.31■■■□□ 2.6
SH2D4AQ9H788 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.3■■■□□ 2.6
SH2D4AQ9H788 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.3■■■□□ 2.6
SH2D4AQ9H788 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SH2D4AQ9H788 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.29■■■□□ 2.6
SH2D4AQ9H788 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SH2D4AQ9H788 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.28■■■□□ 2.6
SH2D4AQ9H788 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
SH2D4AQ9H788 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.27■■■□□ 2.6
SH2D4AQ9H788 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SH2D4AQ9H788 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.27■■■□□ 2.6
SH2D4AQ9H788 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SH2D4AQ9H788 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
SH2D4AQ9H788 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
SH2D4AQ9H788 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SH2D4AQ9H788 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SH2D4AQ9H788 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SH2D4AQ9H788 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SH2D4AQ9H788 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.23■■■□□ 2.59
SH2D4AQ9H788 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.23■■■□□ 2.59
SH2D4AQ9H788 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.21■■■□□ 2.59
SH2D4AQ9H788 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.21■■■□□ 2.59
SH2D4AQ9H788 MIR6090-201ENST00000622481 60 ntBASIC31.19■■■□□ 2.58
SH2D4AQ9H788 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SH2D4AQ9H788 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SH2D4AQ9H788 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
SH2D4AQ9H788 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.18■■■□□ 2.58
SH2D4AQ9H788 AC021231.2-201ENST00000594613 730 ntBASIC31.18■■■□□ 2.58
SH2D4AQ9H788 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SH2D4AQ9H788 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SH2D4AQ9H788 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SH2D4AQ9H788 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.15■■■□□ 2.58
SH2D4AQ9H788 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SH2D4AQ9H788 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SH2D4AQ9H788 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SH2D4AQ9H788 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
SH2D4AQ9H788 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SH2D4AQ9H788 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SH2D4AQ9H788 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
SH2D4AQ9H788 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SH2D4AQ9H788 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.12■■■□□ 2.57
SH2D4AQ9H788 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SH2D4AQ9H788 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SH2D4AQ9H788 HLA-V-202ENST00000446817 847 ntBASIC31.11■■■□□ 2.57
SH2D4AQ9H788 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SH2D4AQ9H788 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
SH2D4AQ9H788 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.09■■■□□ 2.57
SH2D4AQ9H788 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SH2D4AQ9H788 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SH2D4AQ9H788 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SH2D4AQ9H788 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.07■■■□□ 2.56
SH2D4AQ9H788 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.06■■■□□ 2.56
SH2D4AQ9H788 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
SH2D4AQ9H788 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SH2D4AQ9H788 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
SH2D4AQ9H788 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
SH2D4AQ9H788 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SH2D4AQ9H788 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.02■■■□□ 2.56
SH2D4AQ9H788 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
SH2D4AQ9H788 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.01■■■□□ 2.55
SH2D4AQ9H788 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SH2D4AQ9H788 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SH2D4AQ9H788 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31■■■□□ 2.55
SH2D4AQ9H788 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
SH2D4AQ9H788 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SH2D4AQ9H788 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
SH2D4AQ9H788 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.97■■■□□ 2.55
SH2D4AQ9H788 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SH2D4AQ9H788 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
SH2D4AQ9H788 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
SH2D4AQ9H788 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SH2D4AQ9H788 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.94■■■□□ 2.54
SH2D4AQ9H788 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.94■■■□□ 2.54
SH2D4AQ9H788 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SH2D4AQ9H788 AL161658.1-201ENST00000623641 1967 ntBASIC30.94■■■□□ 2.54
SH2D4AQ9H788 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SH2D4AQ9H788 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SH2D4AQ9H788 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
SH2D4AQ9H788 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SH2D4AQ9H788 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms