Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COMMD4Q9H0A8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
COMMD4Q9H0A8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COMMD4Q9H0A8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
COMMD4Q9H0A8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.4■■□□□ 1.34
COMMD4Q9H0A8 AL031258.1-201ENST00000623562 325 ntBASIC23.4■■□□□ 1.34
COMMD4Q9H0A8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COMMD4Q9H0A8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.39■■□□□ 1.34
COMMD4Q9H0A8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.39■■□□□ 1.33
COMMD4Q9H0A8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COMMD4Q9H0A8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COMMD4Q9H0A8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.38■■□□□ 1.33
COMMD4Q9H0A8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COMMD4Q9H0A8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COMMD4Q9H0A8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COMMD4Q9H0A8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
COMMD4Q9H0A8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COMMD4Q9H0A8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COMMD4Q9H0A8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COMMD4Q9H0A8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COMMD4Q9H0A8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
COMMD4Q9H0A8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COMMD4Q9H0A8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COMMD4Q9H0A8 AL135925.1-201ENST00000605920 1701 ntBASIC23.33■■□□□ 1.33
COMMD4Q9H0A8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
COMMD4Q9H0A8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COMMD4Q9H0A8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COMMD4Q9H0A8 AP002365.1-201ENST00000603448 772 ntBASIC23.32■■□□□ 1.32
COMMD4Q9H0A8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COMMD4Q9H0A8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COMMD4Q9H0A8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COMMD4Q9H0A8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COMMD4Q9H0A8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.3■■□□□ 1.32
COMMD4Q9H0A8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COMMD4Q9H0A8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COMMD4Q9H0A8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
COMMD4Q9H0A8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.29■■□□□ 1.32
COMMD4Q9H0A8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
COMMD4Q9H0A8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COMMD4Q9H0A8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COMMD4Q9H0A8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COMMD4Q9H0A8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
COMMD4Q9H0A8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
COMMD4Q9H0A8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
COMMD4Q9H0A8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.26■■□□□ 1.31
COMMD4Q9H0A8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COMMD4Q9H0A8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COMMD4Q9H0A8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
COMMD4Q9H0A8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COMMD4Q9H0A8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COMMD4Q9H0A8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COMMD4Q9H0A8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.22■■□□□ 1.31
COMMD4Q9H0A8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COMMD4Q9H0A8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COMMD4Q9H0A8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.22■■□□□ 1.31
COMMD4Q9H0A8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
COMMD4Q9H0A8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
COMMD4Q9H0A8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COMMD4Q9H0A8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COMMD4Q9H0A8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COMMD4Q9H0A8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.19■■□□□ 1.3
COMMD4Q9H0A8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
COMMD4Q9H0A8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COMMD4Q9H0A8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.17■■□□□ 1.3
COMMD4Q9H0A8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
COMMD4Q9H0A8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COMMD4Q9H0A8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COMMD4Q9H0A8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COMMD4Q9H0A8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COMMD4Q9H0A8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
COMMD4Q9H0A8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
COMMD4Q9H0A8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.14■■□□□ 1.29
COMMD4Q9H0A8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COMMD4Q9H0A8 AC142086.6-201ENST00000621154 1765 ntBASIC23.14■■□□□ 1.29
COMMD4Q9H0A8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.14■■□□□ 1.29
COMMD4Q9H0A8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COMMD4Q9H0A8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
COMMD4Q9H0A8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.13■■□□□ 1.29
COMMD4Q9H0A8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COMMD4Q9H0A8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
COMMD4Q9H0A8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COMMD4Q9H0A8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COMMD4Q9H0A8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COMMD4Q9H0A8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.11■■□□□ 1.29
COMMD4Q9H0A8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.11■■□□□ 1.29
COMMD4Q9H0A8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COMMD4Q9H0A8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COMMD4Q9H0A8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COMMD4Q9H0A8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COMMD4Q9H0A8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
COMMD4Q9H0A8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COMMD4Q9H0A8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.09■■□□□ 1.29
COMMD4Q9H0A8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COMMD4Q9H0A8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COMMD4Q9H0A8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.08■■□□□ 1.29
COMMD4Q9H0A8 WASH5P-204ENST00000632292 975 ntBASIC23.08■■□□□ 1.29
COMMD4Q9H0A8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COMMD4Q9H0A8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COMMD4Q9H0A8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COMMD4Q9H0A8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms