Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
LYSMD1Q96S90 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.75■■□□□ 1.87
LYSMD1Q96S90 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
LYSMD1Q96S90 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
LYSMD1Q96S90 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
LYSMD1Q96S90 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.74■■□□□ 1.87
LYSMD1Q96S90 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
LYSMD1Q96S90 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.74■■□□□ 1.87
LYSMD1Q96S90 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
LYSMD1Q96S90 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
LYSMD1Q96S90 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.72■■□□□ 1.87
LYSMD1Q96S90 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.71■■□□□ 1.87
LYSMD1Q96S90 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.71■■□□□ 1.87
LYSMD1Q96S90 AC005559.1-201ENST00000589661 871 ntBASIC26.71■■□□□ 1.87
LYSMD1Q96S90 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
LYSMD1Q96S90 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.71■■□□□ 1.87
LYSMD1Q96S90 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
LYSMD1Q96S90 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
LYSMD1Q96S90 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.7■■□□□ 1.86
LYSMD1Q96S90 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.7■■□□□ 1.86
LYSMD1Q96S90 MIR3665-201ENST00000578708 105 ntBASIC26.7■■□□□ 1.86
LYSMD1Q96S90 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.7■■□□□ 1.86
LYSMD1Q96S90 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
LYSMD1Q96S90 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
LYSMD1Q96S90 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
LYSMD1Q96S90 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
LYSMD1Q96S90 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.68■■□□□ 1.86
LYSMD1Q96S90 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
LYSMD1Q96S90 DUX4L28-201ENST00000623687 678 ntBASIC26.68■■□□□ 1.86
LYSMD1Q96S90 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.67■■□□□ 1.86
LYSMD1Q96S90 AL162393.1-201ENST00000437852 946 ntBASIC26.67■■□□□ 1.86
LYSMD1Q96S90 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LYSMD1Q96S90 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
LYSMD1Q96S90 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
LYSMD1Q96S90 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
LYSMD1Q96S90 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LYSMD1Q96S90 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
LYSMD1Q96S90 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LYSMD1Q96S90 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
LYSMD1Q96S90 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LYSMD1Q96S90 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LYSMD1Q96S90 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.62■■□□□ 1.85
LYSMD1Q96S90 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LYSMD1Q96S90 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LYSMD1Q96S90 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.61■■□□□ 1.85
LYSMD1Q96S90 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LYSMD1Q96S90 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.6■■□□□ 1.85
LYSMD1Q96S90 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.6■■□□□ 1.85
LYSMD1Q96S90 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.6■■□□□ 1.85
LYSMD1Q96S90 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LYSMD1Q96S90 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LYSMD1Q96S90 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LYSMD1Q96S90 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.58■■□□□ 1.85
LYSMD1Q96S90 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.57■■□□□ 1.84
LYSMD1Q96S90 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
LYSMD1Q96S90 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.56■■□□□ 1.84
LYSMD1Q96S90 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LYSMD1Q96S90 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LYSMD1Q96S90 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LYSMD1Q96S90 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
LYSMD1Q96S90 AC087741.3-201ENST00000624270 1347 ntBASIC26.54■■□□□ 1.84
LYSMD1Q96S90 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LYSMD1Q96S90 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LYSMD1Q96S90 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
LYSMD1Q96S90 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LYSMD1Q96S90 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LYSMD1Q96S90 AL135925.1-201ENST00000605920 1701 ntBASIC26.51■■□□□ 1.83
LYSMD1Q96S90 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.51■■□□□ 1.83
LYSMD1Q96S90 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LYSMD1Q96S90 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.5■■□□□ 1.83
LYSMD1Q96S90 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.5■■□□□ 1.83
LYSMD1Q96S90 RPS2P35-201ENST00000443417 897 ntBASIC26.5■■□□□ 1.83
LYSMD1Q96S90 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LYSMD1Q96S90 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
LYSMD1Q96S90 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LYSMD1Q96S90 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LYSMD1Q96S90 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
LYSMD1Q96S90 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LYSMD1Q96S90 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.48■■□□□ 1.83
LYSMD1Q96S90 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
LYSMD1Q96S90 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LYSMD1Q96S90 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
LYSMD1Q96S90 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LYSMD1Q96S90 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LYSMD1Q96S90 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.46■■□□□ 1.83
LYSMD1Q96S90 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LYSMD1Q96S90 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
LYSMD1Q96S90 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LYSMD1Q96S90 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.45■■□□□ 1.82
LYSMD1Q96S90 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
LYSMD1Q96S90 AC010864.1-201ENST00000609407 1511 ntBASIC26.44■■□□□ 1.82
LYSMD1Q96S90 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
LYSMD1Q96S90 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
LYSMD1Q96S90 AC044849.2-201ENST00000606596 710 ntBASIC26.42■■□□□ 1.82
LYSMD1Q96S90 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LYSMD1Q96S90 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.4■■□□□ 1.82
LYSMD1Q96S90 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.4■■□□□ 1.82
LYSMD1Q96S90 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
LYSMD1Q96S90 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LYSMD1Q96S90 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms