Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.07■■■□□ 2.4
ATP6V0A1Q93050 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.07■■■□□ 2.4
ATP6V0A1Q93050 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
ATP6V0A1Q93050 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.06■■■□□ 2.4
ATP6V0A1Q93050 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
ATP6V0A1Q93050 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.05■■■□□ 2.4
ATP6V0A1Q93050 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ATP6V0A1Q93050 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.04■■■□□ 2.4
ATP6V0A1Q93050 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.03■■■□□ 2.4
ATP6V0A1Q93050 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
ATP6V0A1Q93050 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.02■■■□□ 2.4
ATP6V0A1Q93050 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.02■■■□□ 2.4
ATP6V0A1Q93050 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30■■■□□ 2.39
ATP6V0A1Q93050 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ATP6V0A1Q93050 ZNRF2P2-203ENST00000454624 420 ntBASIC29.99■■■□□ 2.39
ATP6V0A1Q93050 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ATP6V0A1Q93050 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
ATP6V0A1Q93050 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ATP6V0A1Q93050 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
ATP6V0A1Q93050 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ATP6V0A1Q93050 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.96■■■□□ 2.39
ATP6V0A1Q93050 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.95■■■□□ 2.39
ATP6V0A1Q93050 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.95■■■□□ 2.39
ATP6V0A1Q93050 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.95■■■□□ 2.39
ATP6V0A1Q93050 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.95■■■□□ 2.38
ATP6V0A1Q93050 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ATP6V0A1Q93050 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.93■■■□□ 2.38
ATP6V0A1Q93050 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ATP6V0A1Q93050 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
ATP6V0A1Q93050 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.9■■■□□ 2.38
ATP6V0A1Q93050 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
ATP6V0A1Q93050 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.9■■■□□ 2.38
ATP6V0A1Q93050 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 DUX4L29-201ENST00000425409 679 ntBASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 HLA-V-202ENST00000446817 847 ntBASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.89■■■□□ 2.37
ATP6V0A1Q93050 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.88■■■□□ 2.37
ATP6V0A1Q93050 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.87■■■□□ 2.37
ATP6V0A1Q93050 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.86■■■□□ 2.37
ATP6V0A1Q93050 AL161658.1-201ENST00000623641 1967 ntBASIC29.85■■■□□ 2.37
ATP6V0A1Q93050 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
ATP6V0A1Q93050 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.85■■■□□ 2.37
ATP6V0A1Q93050 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ATP6V0A1Q93050 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.84■■■□□ 2.37
ATP6V0A1Q93050 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
ATP6V0A1Q93050 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ATP6V0A1Q93050 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ATP6V0A1Q93050 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ATP6V0A1Q93050 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
ATP6V0A1Q93050 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ATP6V0A1Q93050 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
ATP6V0A1Q93050 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ATP6V0A1Q93050 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.8■■■□□ 2.36
ATP6V0A1Q93050 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ATP6V0A1Q93050 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ATP6V0A1Q93050 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
ATP6V0A1Q93050 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ATP6V0A1Q93050 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.79■■■□□ 2.36
ATP6V0A1Q93050 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ATP6V0A1Q93050 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
ATP6V0A1Q93050 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
ATP6V0A1Q93050 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 AC108673.1-201ENST00000510422 1159 ntBASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 AC021231.2-201ENST00000594613 730 ntBASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.76■■■□□ 2.35
ATP6V0A1Q93050 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ATP6V0A1Q93050 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
ATP6V0A1Q93050 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ATP6V0A1Q93050 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ATP6V0A1Q93050 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
ATP6V0A1Q93050 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ATP6V0A1Q93050 MIR6090-201ENST00000622481 60 ntBASIC29.74■■■□□ 2.35
ATP6V0A1Q93050 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.73■■■□□ 2.35
ATP6V0A1Q93050 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ATP6V0A1Q93050 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
ATP6V0A1Q93050 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
ATP6V0A1Q93050 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
ATP6V0A1Q93050 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.72■■■□□ 2.35
ATP6V0A1Q93050 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.71■■■□□ 2.35
ATP6V0A1Q93050 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.71■■■□□ 2.35
ATP6V0A1Q93050 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
ATP6V0A1Q93050 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
ATP6V0A1Q93050 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.7■■■□□ 2.35
ATP6V0A1Q93050 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
ATP6V0A1Q93050 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.69■■■□□ 2.34
ATP6V0A1Q93050 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms