Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC11.52□□□□□ -0.57
SYNE2Q8WXH0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC11.52□□□□□ -0.57
SYNE2Q8WXH0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SYNE2Q8WXH0 AC145285.7-201ENST00000614819 1539 ntBASIC11.52□□□□□ -0.57
SYNE2Q8WXH0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SYNE2Q8WXH0 GFER-205ENST00000569451 517 ntTSL 5 BASIC11.51□□□□□ -0.57
SYNE2Q8WXH0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC11.51□□□□□ -0.57
SYNE2Q8WXH0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SYNE2Q8WXH0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC11.51□□□□□ -0.57
SYNE2Q8WXH0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC11.51□□□□□ -0.57
SYNE2Q8WXH0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SYNE2Q8WXH0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SYNE2Q8WXH0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC11.5□□□□□ -0.57
SYNE2Q8WXH0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SYNE2Q8WXH0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC11.5□□□□□ -0.57
SYNE2Q8WXH0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC11.5□□□□□ -0.57
SYNE2Q8WXH0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC11.49□□□□□ -0.57
SYNE2Q8WXH0 AC131212.1-201ENST00000613771 668 ntBASIC11.49□□□□□ -0.57
SYNE2Q8WXH0 MVK-208ENST00000539696 608 ntTSL 5 BASIC11.49□□□□□ -0.57
SYNE2Q8WXH0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC11.49□□□□□ -0.57
SYNE2Q8WXH0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC11.49□□□□□ -0.57
SYNE2Q8WXH0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC11.49□□□□□ -0.57
SYNE2Q8WXH0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SYNE2Q8WXH0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SYNE2Q8WXH0 AC004987.1-201ENST00000428627 508 ntBASIC11.47□□□□□ -0.57
SYNE2Q8WXH0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC11.47□□□□□ -0.57
SYNE2Q8WXH0 LINC01971-201ENST00000617888 1048 ntBASIC11.47□□□□□ -0.57
SYNE2Q8WXH0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SYNE2Q8WXH0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SYNE2Q8WXH0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC11.47□□□□□ -0.57
SYNE2Q8WXH0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SYNE2Q8WXH0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC11.47□□□□□ -0.57
SYNE2Q8WXH0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SYNE2Q8WXH0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SYNE2Q8WXH0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SYNE2Q8WXH0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC11.46□□□□□ -0.58
SYNE2Q8WXH0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
SYNE2Q8WXH0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC11.46□□□□□ -0.58
SYNE2Q8WXH0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC11.45□□□□□ -0.58
SYNE2Q8WXH0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC11.45□□□□□ -0.58
SYNE2Q8WXH0 GPX1-201ENST00000419349 1106 ntBASIC11.45□□□□□ -0.58
SYNE2Q8WXH0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SYNE2Q8WXH0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC11.45□□□□□ -0.58
SYNE2Q8WXH0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC11.45□□□□□ -0.58
SYNE2Q8WXH0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC11.45□□□□□ -0.58
SYNE2Q8WXH0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SYNE2Q8WXH0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SYNE2Q8WXH0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SYNE2Q8WXH0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SYNE2Q8WXH0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SYNE2Q8WXH0 TSPY13P-201ENST00000338964 914 ntBASIC11.43□□□□□ -0.58
SYNE2Q8WXH0 AC025884.2-201ENST00000553429 711 ntBASIC11.42□□□□□ -0.58
SYNE2Q8WXH0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
SYNE2Q8WXH0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SYNE2Q8WXH0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 HES4-204ENST00000484667 667 ntTSL 3 BASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 DUX4L13-201ENST00000554103 1267 ntBASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 DUX4L15-201ENST00000611059 1267 ntBASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 DUX4L23-201ENST00000615195 1269 ntBASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 DUX4L24-201ENST00000617576 1269 ntBASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 DUX4L22-201ENST00000618238 1269 ntBASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 DUX4L20-201ENST00000619712 1269 ntBASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 DUX4L21-201ENST00000622058 1269 ntBASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 DUX4L10-201ENST00000622460 1267 ntBASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 DUX4L25-201ENST00000624915 1269 ntBASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC11.41□□□□□ -0.58
SYNE2Q8WXH0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SYNE2Q8WXH0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
SYNE2Q8WXH0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC11.4□□□□□ -0.58
SYNE2Q8WXH0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC11.4□□□□□ -0.58
SYNE2Q8WXH0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SYNE2Q8WXH0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SYNE2Q8WXH0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SYNE2Q8WXH0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SYNE2Q8WXH0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SYNE2Q8WXH0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC11.39□□□□□ -0.59
SYNE2Q8WXH0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC11.39□□□□□ -0.59
SYNE2Q8WXH0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SYNE2Q8WXH0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SYNE2Q8WXH0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SYNE2Q8WXH0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
SYNE2Q8WXH0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC11.37□□□□□ -0.59
SYNE2Q8WXH0 THA1P-201ENST00000590384 1145 ntBASIC11.37□□□□□ -0.59
SYNE2Q8WXH0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SYNE2Q8WXH0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SYNE2Q8WXH0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
SYNE2Q8WXH0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SYNE2Q8WXH0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SYNE2Q8WXH0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SYNE2Q8WXH0 HES6-205ENST00000409356 528 ntTSL 2 BASIC11.34□□□□□ -0.59
SYNE2Q8WXH0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SYNE2Q8WXH0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SYNE2Q8WXH0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC11.34□□□□□ -0.59
SYNE2Q8WXH0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SYNE2Q8WXH0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SYNE2Q8WXH0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SYNE2Q8WXH0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SYNE2Q8WXH0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms