Protein–RNA interactions for Protein: Q8N7U7

TPRX1, Tetra-peptide repeat homeobox protein 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1Q8N7U7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
TPRX1Q8N7U7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TPRX1Q8N7U7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TPRX1Q8N7U7 AL391121.1-201ENST00000607967 1349 ntBASIC22.22■■□□□ 1.15
TPRX1Q8N7U7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TPRX1Q8N7U7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TPRX1Q8N7U7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TPRX1Q8N7U7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.21■■□□□ 1.15
TPRX1Q8N7U7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TPRX1Q8N7U7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TPRX1Q8N7U7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.18■■□□□ 1.14
TPRX1Q8N7U7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TPRX1Q8N7U7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.18■■□□□ 1.14
TPRX1Q8N7U7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TPRX1Q8N7U7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.18■■□□□ 1.14
TPRX1Q8N7U7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TPRX1Q8N7U7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
TPRX1Q8N7U7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TPRX1Q8N7U7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.17■■□□□ 1.14
TPRX1Q8N7U7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TPRX1Q8N7U7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TPRX1Q8N7U7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TPRX1Q8N7U7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.16■■□□□ 1.14
TPRX1Q8N7U7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TPRX1Q8N7U7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TPRX1Q8N7U7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TPRX1Q8N7U7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.14■■□□□ 1.13
TPRX1Q8N7U7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
TPRX1Q8N7U7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
TPRX1Q8N7U7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TPRX1Q8N7U7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TPRX1Q8N7U7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
TPRX1Q8N7U7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TPRX1Q8N7U7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TPRX1Q8N7U7 ST7-AS1-201ENST00000456775 1889 ntBASIC22.11■■□□□ 1.13
TPRX1Q8N7U7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TPRX1Q8N7U7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TPRX1Q8N7U7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.1■■□□□ 1.13
TPRX1Q8N7U7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TPRX1Q8N7U7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TPRX1Q8N7U7 AL135925.1-201ENST00000605920 1701 ntBASIC22.09■■□□□ 1.13
TPRX1Q8N7U7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TPRX1Q8N7U7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TPRX1Q8N7U7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
TPRX1Q8N7U7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
TPRX1Q8N7U7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TPRX1Q8N7U7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.08■■□□□ 1.13
TPRX1Q8N7U7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPRX1Q8N7U7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPRX1Q8N7U7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPRX1Q8N7U7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPRX1Q8N7U7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.06■■□□□ 1.12
TPRX1Q8N7U7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPRX1Q8N7U7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TPRX1Q8N7U7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPRX1Q8N7U7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPRX1Q8N7U7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPRX1Q8N7U7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.05■■□□□ 1.12
TPRX1Q8N7U7 AC139426.1-201ENST00000568218 2529 ntBASIC22.04■■□□□ 1.12
TPRX1Q8N7U7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.04■■□□□ 1.12
TPRX1Q8N7U7 SUZ12P1-203ENST00000578195 985 ntBASIC22.04■■□□□ 1.12
TPRX1Q8N7U7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPRX1Q8N7U7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
TPRX1Q8N7U7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPRX1Q8N7U7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPRX1Q8N7U7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TPRX1Q8N7U7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TPRX1Q8N7U7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
TPRX1Q8N7U7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPRX1Q8N7U7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPRX1Q8N7U7 ABCB10P3-201ENST00000561950 2166 ntBASIC22.01■■□□□ 1.11
TPRX1Q8N7U7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPRX1Q8N7U7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22■■□□□ 1.11
TPRX1Q8N7U7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TPRX1Q8N7U7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TPRX1Q8N7U7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TPRX1Q8N7U7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.98■■□□□ 1.11
TPRX1Q8N7U7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TPRX1Q8N7U7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TPRX1Q8N7U7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TPRX1Q8N7U7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TPRX1Q8N7U7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TPRX1Q8N7U7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TPRX1Q8N7U7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TPRX1Q8N7U7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
TPRX1Q8N7U7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TPRX1Q8N7U7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPRX1Q8N7U7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.96■■□□□ 1.11
TPRX1Q8N7U7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TPRX1Q8N7U7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
TPRX1Q8N7U7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TPRX1Q8N7U7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TPRX1Q8N7U7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TPRX1Q8N7U7 MIR762-201ENST00000390236 83 ntBASIC21.93■■□□□ 1.1
TPRX1Q8N7U7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.93■■□□□ 1.1
TPRX1Q8N7U7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPRX1Q8N7U7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPRX1Q8N7U7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
TPRX1Q8N7U7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.92■■□□□ 1.1
TPRX1Q8N7U7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms