Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SIX5Q8N196 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
SIX5Q8N196 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.75■■■□□ 2.03
SIX5Q8N196 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.75■■■□□ 2.03
SIX5Q8N196 LINC01971-201ENST00000617888 1048 ntBASIC27.75■■■□□ 2.03
SIX5Q8N196 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SIX5Q8N196 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SIX5Q8N196 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
SIX5Q8N196 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.72■■■□□ 2.03
SIX5Q8N196 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SIX5Q8N196 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SIX5Q8N196 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.69■■■□□ 2.02
SIX5Q8N196 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SIX5Q8N196 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
SIX5Q8N196 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
SIX5Q8N196 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
SIX5Q8N196 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.67■■■□□ 2.02
SIX5Q8N196 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.67■■■□□ 2.02
SIX5Q8N196 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
SIX5Q8N196 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SIX5Q8N196 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SIX5Q8N196 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SIX5Q8N196 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SIX5Q8N196 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
SIX5Q8N196 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
SIX5Q8N196 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SIX5Q8N196 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.61■■■□□ 2.01
SIX5Q8N196 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SIX5Q8N196 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SIX5Q8N196 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
SIX5Q8N196 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.6■■■□□ 2.01
SIX5Q8N196 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.6■■■□□ 2.01
SIX5Q8N196 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.6■■■□□ 2.01
SIX5Q8N196 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
SIX5Q8N196 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SIX5Q8N196 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SIX5Q8N196 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SIX5Q8N196 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.57■■■□□ 2
SIX5Q8N196 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
SIX5Q8N196 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.54■■■□□ 2
SIX5Q8N196 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.54■■■□□ 2
SIX5Q8N196 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SIX5Q8N196 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SIX5Q8N196 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.53■■■□□ 2
SIX5Q8N196 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.52■■■□□ 2
SIX5Q8N196 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.52■■■□□ 2
SIX5Q8N196 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SIX5Q8N196 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.51■■□□□ 1.99
SIX5Q8N196 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.51■■□□□ 1.99
SIX5Q8N196 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SIX5Q8N196 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SIX5Q8N196 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SIX5Q8N196 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SIX5Q8N196 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SIX5Q8N196 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SIX5Q8N196 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SIX5Q8N196 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SIX5Q8N196 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.47■■□□□ 1.99
SIX5Q8N196 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SIX5Q8N196 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.46■■□□□ 1.99
SIX5Q8N196 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SIX5Q8N196 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.44■■□□□ 1.98
SIX5Q8N196 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SIX5Q8N196 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SIX5Q8N196 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.43■■□□□ 1.98
SIX5Q8N196 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SIX5Q8N196 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SIX5Q8N196 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.41■■□□□ 1.98
SIX5Q8N196 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SIX5Q8N196 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L13-201ENST00000554103 1267 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L15-201ENST00000611059 1267 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L23-201ENST00000615195 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L24-201ENST00000617576 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L22-201ENST00000618238 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L20-201ENST00000619712 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L21-201ENST00000622058 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L10-201ENST00000622460 1267 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L25-201ENST00000624915 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
SIX5Q8N196 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SIX5Q8N196 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.37■■□□□ 1.97
SIX5Q8N196 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.37■■□□□ 1.97
SIX5Q8N196 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.37■■□□□ 1.97
SIX5Q8N196 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SIX5Q8N196 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.35■■□□□ 1.97
SIX5Q8N196 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
SIX5Q8N196 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SIX5Q8N196 RARRES2P2-201ENST00000394842 485 ntBASIC27.34■■□□□ 1.97
SIX5Q8N196 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.34■■□□□ 1.97
SIX5Q8N196 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.33■■□□□ 1.97
SIX5Q8N196 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.33■■□□□ 1.97
SIX5Q8N196 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SIX5Q8N196 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.31■■□□□ 1.96
SIX5Q8N196 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.31■■□□□ 1.96
SIX5Q8N196 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SIX5Q8N196 ABHD17AP5-201ENST00000580133 923 ntBASIC27.3■■□□□ 1.96
SIX5Q8N196 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SIX5Q8N196 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SIX5Q8N196 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms