Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SFTPA1Q8IWL2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
SFTPA1Q8IWL2 HLA-V-202ENST00000446817 847 ntBASIC27.44■■□□□ 1.98
SFTPA1Q8IWL2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.44■■□□□ 1.98
SFTPA1Q8IWL2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SFTPA1Q8IWL2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.43■■□□□ 1.98
SFTPA1Q8IWL2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.43■■□□□ 1.98
SFTPA1Q8IWL2 MIR6090-201ENST00000622481 60 ntBASIC27.43■■□□□ 1.98
SFTPA1Q8IWL2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.42■■□□□ 1.98
SFTPA1Q8IWL2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SFTPA1Q8IWL2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
SFTPA1Q8IWL2 DUX4L29-201ENST00000425409 679 ntBASIC27.41■■□□□ 1.98
SFTPA1Q8IWL2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SFTPA1Q8IWL2 AC021231.2-201ENST00000594613 730 ntBASIC27.41■■□□□ 1.98
SFTPA1Q8IWL2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.4■■□□□ 1.98
SFTPA1Q8IWL2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SFTPA1Q8IWL2 AC120057.4-201ENST00000624722 1615 ntBASIC27.38■■□□□ 1.97
SFTPA1Q8IWL2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SFTPA1Q8IWL2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SFTPA1Q8IWL2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.37■■□□□ 1.97
SFTPA1Q8IWL2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SFTPA1Q8IWL2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SFTPA1Q8IWL2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SFTPA1Q8IWL2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SFTPA1Q8IWL2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.34■■□□□ 1.97
SFTPA1Q8IWL2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.33■■□□□ 1.97
SFTPA1Q8IWL2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
SFTPA1Q8IWL2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SFTPA1Q8IWL2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
SFTPA1Q8IWL2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.32■■□□□ 1.96
SFTPA1Q8IWL2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SFTPA1Q8IWL2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SFTPA1Q8IWL2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SFTPA1Q8IWL2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.3■■□□□ 1.96
SFTPA1Q8IWL2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SFTPA1Q8IWL2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.29■■□□□ 1.96
SFTPA1Q8IWL2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.29■■□□□ 1.96
SFTPA1Q8IWL2 AC108673.1-201ENST00000510422 1159 ntBASIC27.28■■□□□ 1.96
SFTPA1Q8IWL2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
SFTPA1Q8IWL2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SFTPA1Q8IWL2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SFTPA1Q8IWL2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.27■■□□□ 1.96
SFTPA1Q8IWL2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
SFTPA1Q8IWL2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.26■■□□□ 1.95
SFTPA1Q8IWL2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SFTPA1Q8IWL2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SFTPA1Q8IWL2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SFTPA1Q8IWL2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SFTPA1Q8IWL2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
SFTPA1Q8IWL2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
SFTPA1Q8IWL2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.23■■□□□ 1.95
SFTPA1Q8IWL2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.22■■□□□ 1.95
SFTPA1Q8IWL2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
SFTPA1Q8IWL2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SFTPA1Q8IWL2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
SFTPA1Q8IWL2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.21■■□□□ 1.95
SFTPA1Q8IWL2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SFTPA1Q8IWL2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
SFTPA1Q8IWL2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.2■■□□□ 1.94
SFTPA1Q8IWL2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SFTPA1Q8IWL2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SFTPA1Q8IWL2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.19■■□□□ 1.94
SFTPA1Q8IWL2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
SFTPA1Q8IWL2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.18■■□□□ 1.94
SFTPA1Q8IWL2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SFTPA1Q8IWL2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
SFTPA1Q8IWL2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SFTPA1Q8IWL2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SFTPA1Q8IWL2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SFTPA1Q8IWL2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SFTPA1Q8IWL2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SFTPA1Q8IWL2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SFTPA1Q8IWL2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
SFTPA1Q8IWL2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.12■■□□□ 1.93
SFTPA1Q8IWL2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
SFTPA1Q8IWL2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
SFTPA1Q8IWL2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SFTPA1Q8IWL2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.11■■□□□ 1.93
SFTPA1Q8IWL2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.1■■□□□ 1.93
SFTPA1Q8IWL2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SFTPA1Q8IWL2 AC016575.1-201ENST00000607026 382 ntBASIC27.08■■□□□ 1.93
SFTPA1Q8IWL2 AL161658.1-201ENST00000623641 1967 ntBASIC27.08■■□□□ 1.92
SFTPA1Q8IWL2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.07■■□□□ 1.92
SFTPA1Q8IWL2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.07■■□□□ 1.92
SFTPA1Q8IWL2 MIR3648-2-201ENST00000581792 180 ntBASIC27.07■■□□□ 1.92
SFTPA1Q8IWL2 MIR3648-1-201ENST00000615959 180 ntBASIC27.07■■□□□ 1.92
SFTPA1Q8IWL2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SFTPA1Q8IWL2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SFTPA1Q8IWL2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SFTPA1Q8IWL2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SFTPA1Q8IWL2 DUX4L11-201ENST00000611504 1267 ntBASIC27.05■■□□□ 1.92
SFTPA1Q8IWL2 DUX4L12-201ENST00000614593 1267 ntBASIC27.05■■□□□ 1.92
SFTPA1Q8IWL2 DUX4L14-201ENST00000621227 1267 ntBASIC27.05■■□□□ 1.92
SFTPA1Q8IWL2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.05■■□□□ 1.92
SFTPA1Q8IWL2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SFTPA1Q8IWL2 MIR639-201ENST00000384974 98 ntBASIC27.04■■□□□ 1.92
SFTPA1Q8IWL2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
SFTPA1Q8IWL2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SFTPA1Q8IWL2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SFTPA1Q8IWL2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.03■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms