Protein–RNA interactions for Protein: Q8IUX4

APOBEC3F, DNA dC->dU-editing enzyme APOBEC-3F, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3FQ8IUX4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
APOBEC3FQ8IUX4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.2■■■□□ 2.75
APOBEC3FQ8IUX4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
APOBEC3FQ8IUX4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
APOBEC3FQ8IUX4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
APOBEC3FQ8IUX4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.18■■■□□ 2.74
APOBEC3FQ8IUX4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.18■■■□□ 2.74
APOBEC3FQ8IUX4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.17■■■□□ 2.74
APOBEC3FQ8IUX4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
APOBEC3FQ8IUX4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
APOBEC3FQ8IUX4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.17■■■□□ 2.74
APOBEC3FQ8IUX4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.17■■■□□ 2.74
APOBEC3FQ8IUX4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
APOBEC3FQ8IUX4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.16■■■□□ 2.74
APOBEC3FQ8IUX4 LINC01971-201ENST00000617888 1048 ntBASIC32.16■■■□□ 2.74
APOBEC3FQ8IUX4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
APOBEC3FQ8IUX4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
APOBEC3FQ8IUX4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.15■■■□□ 2.74
APOBEC3FQ8IUX4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
APOBEC3FQ8IUX4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC32.15■■■□□ 2.74
APOBEC3FQ8IUX4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74
APOBEC3FQ8IUX4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC32.14■■■□□ 2.74
APOBEC3FQ8IUX4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
APOBEC3FQ8IUX4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.13■■■□□ 2.73
APOBEC3FQ8IUX4 DUX4L11-201ENST00000611504 1267 ntBASIC32.13■■■□□ 2.73
APOBEC3FQ8IUX4 DUX4L12-201ENST00000614593 1267 ntBASIC32.13■■■□□ 2.73
APOBEC3FQ8IUX4 DUX4L14-201ENST00000621227 1267 ntBASIC32.13■■■□□ 2.73
APOBEC3FQ8IUX4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.12■■■□□ 2.73
APOBEC3FQ8IUX4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
APOBEC3FQ8IUX4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
APOBEC3FQ8IUX4 CR559946.2-201ENST00000623684 991 ntBASIC32.1■■■□□ 2.73
APOBEC3FQ8IUX4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
APOBEC3FQ8IUX4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.09■■■□□ 2.73
APOBEC3FQ8IUX4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
APOBEC3FQ8IUX4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
APOBEC3FQ8IUX4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
APOBEC3FQ8IUX4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
APOBEC3FQ8IUX4 HSD17B1P1-201ENST00000590052 955 ntBASIC32.06■■■□□ 2.72
APOBEC3FQ8IUX4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
APOBEC3FQ8IUX4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
APOBEC3FQ8IUX4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
APOBEC3FQ8IUX4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.05■■■□□ 2.72
APOBEC3FQ8IUX4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
APOBEC3FQ8IUX4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.03■■■□□ 2.72
APOBEC3FQ8IUX4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
APOBEC3FQ8IUX4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
APOBEC3FQ8IUX4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32.02■■■□□ 2.72
APOBEC3FQ8IUX4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.01■■■□□ 2.71
APOBEC3FQ8IUX4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32■■■□□ 2.71
APOBEC3FQ8IUX4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
APOBEC3FQ8IUX4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
APOBEC3FQ8IUX4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
APOBEC3FQ8IUX4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
APOBEC3FQ8IUX4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.97■■■□□ 2.71
APOBEC3FQ8IUX4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
APOBEC3FQ8IUX4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
APOBEC3FQ8IUX4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
APOBEC3FQ8IUX4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.94■■■□□ 2.7
APOBEC3FQ8IUX4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.93■■■□□ 2.7
APOBEC3FQ8IUX4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.92■■■□□ 2.7
APOBEC3FQ8IUX4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
APOBEC3FQ8IUX4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
APOBEC3FQ8IUX4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
APOBEC3FQ8IUX4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
APOBEC3FQ8IUX4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
APOBEC3FQ8IUX4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.89■■■□□ 2.7
APOBEC3FQ8IUX4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
APOBEC3FQ8IUX4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
APOBEC3FQ8IUX4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
APOBEC3FQ8IUX4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
APOBEC3FQ8IUX4 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.86■■■□□ 2.69
APOBEC3FQ8IUX4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.86■■■□□ 2.69
APOBEC3FQ8IUX4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
APOBEC3FQ8IUX4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.86■■■□□ 2.69
APOBEC3FQ8IUX4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
APOBEC3FQ8IUX4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.83■■■□□ 2.69
APOBEC3FQ8IUX4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
APOBEC3FQ8IUX4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
APOBEC3FQ8IUX4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
APOBEC3FQ8IUX4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.8■■■□□ 2.68
APOBEC3FQ8IUX4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
APOBEC3FQ8IUX4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 DUX4L13-201ENST00000554103 1267 ntBASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 DUX4L15-201ENST00000611059 1267 ntBASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 DUX4L23-201ENST00000615195 1269 ntBASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 DUX4L24-201ENST00000617576 1269 ntBASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 DUX4L22-201ENST00000618238 1269 ntBASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 DUX4L20-201ENST00000619712 1269 ntBASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 DUX4L21-201ENST00000622058 1269 ntBASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 DUX4L10-201ENST00000622460 1267 ntBASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 DUX4L25-201ENST00000624915 1269 ntBASIC31.79■■■□□ 2.68
APOBEC3FQ8IUX4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.78■■■□□ 2.68
APOBEC3FQ8IUX4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
APOBEC3FQ8IUX4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
APOBEC3FQ8IUX4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
APOBEC3FQ8IUX4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms