Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RFX6Q8HWS3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RFX6Q8HWS3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.63■■■□□ 2.01
RFX6Q8HWS3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RFX6Q8HWS3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.63■■■□□ 2.01
RFX6Q8HWS3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RFX6Q8HWS3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RFX6Q8HWS3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
RFX6Q8HWS3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.62■■■□□ 2.01
RFX6Q8HWS3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RFX6Q8HWS3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.61■■■□□ 2.01
RFX6Q8HWS3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.61■■■□□ 2.01
RFX6Q8HWS3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RFX6Q8HWS3 ABCB10P3-201ENST00000561950 2166 ntBASIC27.59■■■□□ 2.01
RFX6Q8HWS3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RFX6Q8HWS3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
RFX6Q8HWS3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RFX6Q8HWS3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.59■■■□□ 2.01
RFX6Q8HWS3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RFX6Q8HWS3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
RFX6Q8HWS3 AL135925.1-201ENST00000605920 1701 ntBASIC27.58■■■□□ 2.01
RFX6Q8HWS3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RFX6Q8HWS3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RFX6Q8HWS3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.57■■■□□ 2
RFX6Q8HWS3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RFX6Q8HWS3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.56■■■□□ 2
RFX6Q8HWS3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RFX6Q8HWS3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
RFX6Q8HWS3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.55■■■□□ 2
RFX6Q8HWS3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.55■■■□□ 2
RFX6Q8HWS3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RFX6Q8HWS3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.54■■■□□ 2
RFX6Q8HWS3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RFX6Q8HWS3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
RFX6Q8HWS3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RFX6Q8HWS3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.52■■■□□ 2
RFX6Q8HWS3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.52■■■□□ 2
RFX6Q8HWS3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RFX6Q8HWS3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RFX6Q8HWS3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RFX6Q8HWS3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RFX6Q8HWS3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
RFX6Q8HWS3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.49■■□□□ 1.99
RFX6Q8HWS3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
RFX6Q8HWS3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
RFX6Q8HWS3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RFX6Q8HWS3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
RFX6Q8HWS3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
RFX6Q8HWS3 AC139426.1-201ENST00000568218 2529 ntBASIC27.46■■□□□ 1.99
RFX6Q8HWS3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
RFX6Q8HWS3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.45■■□□□ 1.98
RFX6Q8HWS3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RFX6Q8HWS3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.43■■□□□ 1.98
RFX6Q8HWS3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
RFX6Q8HWS3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
RFX6Q8HWS3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RFX6Q8HWS3 AC097358.2-201ENST00000607541 1159 ntBASIC27.42■■□□□ 1.98
RFX6Q8HWS3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
RFX6Q8HWS3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.41■■□□□ 1.98
RFX6Q8HWS3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RFX6Q8HWS3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RFX6Q8HWS3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.4■■□□□ 1.98
RFX6Q8HWS3 AC136428.2-201ENST00000563187 214 ntBASIC27.4■■□□□ 1.98
RFX6Q8HWS3 AL391121.1-201ENST00000607967 1349 ntBASIC27.4■■□□□ 1.98
RFX6Q8HWS3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
RFX6Q8HWS3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
RFX6Q8HWS3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFX6Q8HWS3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFX6Q8HWS3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.38■■□□□ 1.97
RFX6Q8HWS3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
RFX6Q8HWS3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFX6Q8HWS3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
RFX6Q8HWS3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.37■■□□□ 1.97
RFX6Q8HWS3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFX6Q8HWS3 CAHM-201ENST00000604200 896 ntBASIC27.37■■□□□ 1.97
RFX6Q8HWS3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFX6Q8HWS3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
RFX6Q8HWS3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFX6Q8HWS3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
RFX6Q8HWS3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RFX6Q8HWS3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
RFX6Q8HWS3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RFX6Q8HWS3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RFX6Q8HWS3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RFX6Q8HWS3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.34■■□□□ 1.97
RFX6Q8HWS3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
RFX6Q8HWS3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
RFX6Q8HWS3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFX6Q8HWS3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFX6Q8HWS3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RFX6Q8HWS3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RFX6Q8HWS3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
RFX6Q8HWS3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFX6Q8HWS3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.31■■□□□ 1.96
RFX6Q8HWS3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.3■■□□□ 1.96
RFX6Q8HWS3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RFX6Q8HWS3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
RFX6Q8HWS3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RFX6Q8HWS3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RFX6Q8HWS3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms