Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL55Q7Z7F7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC16.98■□□□□ 0.31
MRPL55Q7Z7F7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MRPL55Q7Z7F7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL55Q7Z7F7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL55Q7Z7F7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL55Q7Z7F7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL55Q7Z7F7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
MRPL55Q7Z7F7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL55Q7Z7F7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL55Q7Z7F7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MRPL55Q7Z7F7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MRPL55Q7Z7F7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MRPL55Q7Z7F7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MRPL55Q7Z7F7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPL55Q7Z7F7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MRPL55Q7Z7F7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPL55Q7Z7F7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
MRPL55Q7Z7F7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPL55Q7Z7F7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MRPL55Q7Z7F7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC16.92■□□□□ 0.3
MRPL55Q7Z7F7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL55Q7Z7F7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL55Q7Z7F7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL55Q7Z7F7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC16.91■□□□□ 0.3
MRPL55Q7Z7F7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL55Q7Z7F7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRPL55Q7Z7F7 ABCB10P3-201ENST00000561950 2166 ntBASIC16.91■□□□□ 0.3
MRPL55Q7Z7F7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC16.9■□□□□ 0.3
MRPL55Q7Z7F7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRPL55Q7Z7F7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRPL55Q7Z7F7 WASH5P-204ENST00000632292 975 ntBASIC16.9■□□□□ 0.3
MRPL55Q7Z7F7 ST7-AS1-201ENST00000456775 1889 ntBASIC16.89■□□□□ 0.29
MRPL55Q7Z7F7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL55Q7Z7F7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL55Q7Z7F7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL55Q7Z7F7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL55Q7Z7F7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL55Q7Z7F7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL55Q7Z7F7 AL133380.1-201ENST00000506013 324 ntBASIC16.88■□□□□ 0.29
MRPL55Q7Z7F7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL55Q7Z7F7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL55Q7Z7F7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPL55Q7Z7F7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL55Q7Z7F7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC16.87■□□□□ 0.29
MRPL55Q7Z7F7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL55Q7Z7F7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL55Q7Z7F7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL55Q7Z7F7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL55Q7Z7F7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
MRPL55Q7Z7F7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MRPL55Q7Z7F7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL55Q7Z7F7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL55Q7Z7F7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL55Q7Z7F7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL55Q7Z7F7 AL135925.1-201ENST00000605920 1701 ntBASIC16.83■□□□□ 0.28
MRPL55Q7Z7F7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.83■□□□□ 0.28
MRPL55Q7Z7F7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
MRPL55Q7Z7F7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL55Q7Z7F7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL55Q7Z7F7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MRPL55Q7Z7F7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPL55Q7Z7F7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC16.82■□□□□ 0.28
MRPL55Q7Z7F7 RARRES2P7-201ENST00000567349 469 ntBASIC16.82■□□□□ 0.28
MRPL55Q7Z7F7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPL55Q7Z7F7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
MRPL55Q7Z7F7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL55Q7Z7F7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL55Q7Z7F7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL55Q7Z7F7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL55Q7Z7F7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MRPL55Q7Z7F7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL55Q7Z7F7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL55Q7Z7F7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL55Q7Z7F7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL55Q7Z7F7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL55Q7Z7F7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC16.79■□□□□ 0.28
MRPL55Q7Z7F7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MRPL55Q7Z7F7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MRPL55Q7Z7F7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
MRPL55Q7Z7F7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRPL55Q7Z7F7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRPL55Q7Z7F7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRPL55Q7Z7F7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
MRPL55Q7Z7F7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPL55Q7Z7F7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPL55Q7Z7F7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRPL55Q7Z7F7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
MRPL55Q7Z7F7 AC139426.1-201ENST00000568218 2529 ntBASIC16.75■□□□□ 0.27
MRPL55Q7Z7F7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL55Q7Z7F7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
MRPL55Q7Z7F7 SETD8P1-201ENST00000623146 1180 ntBASIC16.75■□□□□ 0.27
MRPL55Q7Z7F7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MRPL55Q7Z7F7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL55Q7Z7F7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPL55Q7Z7F7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL55Q7Z7F7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL55Q7Z7F7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MRPL55Q7Z7F7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MRPL55Q7Z7F7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms