Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
DENND4AQ7Z401 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.17■■■□□ 2.1
DENND4AQ7Z401 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.16■■■□□ 2.1
DENND4AQ7Z401 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
DENND4AQ7Z401 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.15■■■□□ 2.1
DENND4AQ7Z401 HSD17B1P1-201ENST00000590052 955 ntBASIC28.15■■■□□ 2.1
DENND4AQ7Z401 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.14■■■□□ 2.1
DENND4AQ7Z401 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
DENND4AQ7Z401 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
DENND4AQ7Z401 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.09
DENND4AQ7Z401 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
DENND4AQ7Z401 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.13■■■□□ 2.09
DENND4AQ7Z401 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.13■■■□□ 2.09
DENND4AQ7Z401 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.13■■■□□ 2.09
DENND4AQ7Z401 MIR6090-201ENST00000622481 60 ntBASIC28.12■■■□□ 2.09
DENND4AQ7Z401 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.12■■■□□ 2.09
DENND4AQ7Z401 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
DENND4AQ7Z401 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.12■■■□□ 2.09
DENND4AQ7Z401 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.11■■■□□ 2.09
DENND4AQ7Z401 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.1■■■□□ 2.09
DENND4AQ7Z401 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
DENND4AQ7Z401 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
DENND4AQ7Z401 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
DENND4AQ7Z401 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
DENND4AQ7Z401 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
DENND4AQ7Z401 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DENND4AQ7Z401 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.07■■■□□ 2.08
DENND4AQ7Z401 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
DENND4AQ7Z401 LINC01971-201ENST00000617888 1048 ntBASIC28.06■■■□□ 2.08
DENND4AQ7Z401 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
DENND4AQ7Z401 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.06■■■□□ 2.08
DENND4AQ7Z401 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
DENND4AQ7Z401 DUX4L11-201ENST00000611504 1267 ntBASIC28.05■■■□□ 2.08
DENND4AQ7Z401 DUX4L12-201ENST00000614593 1267 ntBASIC28.05■■■□□ 2.08
DENND4AQ7Z401 DUX4L14-201ENST00000621227 1267 ntBASIC28.05■■■□□ 2.08
DENND4AQ7Z401 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
DENND4AQ7Z401 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
DENND4AQ7Z401 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
DENND4AQ7Z401 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
DENND4AQ7Z401 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
DENND4AQ7Z401 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.02■■■□□ 2.08
DENND4AQ7Z401 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.02■■■□□ 2.08
DENND4AQ7Z401 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.02■■■□□ 2.08
DENND4AQ7Z401 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.02■■■□□ 2.08
DENND4AQ7Z401 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
DENND4AQ7Z401 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
DENND4AQ7Z401 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28■■■□□ 2.07
DENND4AQ7Z401 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
DENND4AQ7Z401 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
DENND4AQ7Z401 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28■■■□□ 2.07
DENND4AQ7Z401 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
DENND4AQ7Z401 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
DENND4AQ7Z401 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
DENND4AQ7Z401 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.99■■■□□ 2.07
DENND4AQ7Z401 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
DENND4AQ7Z401 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
DENND4AQ7Z401 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.98■■■□□ 2.07
DENND4AQ7Z401 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DENND4AQ7Z401 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.97■■■□□ 2.07
DENND4AQ7Z401 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
DENND4AQ7Z401 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
DENND4AQ7Z401 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
DENND4AQ7Z401 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
DENND4AQ7Z401 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
DENND4AQ7Z401 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.92■■■□□ 2.06
DENND4AQ7Z401 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.92■■■□□ 2.06
DENND4AQ7Z401 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
DENND4AQ7Z401 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
DENND4AQ7Z401 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
DENND4AQ7Z401 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
DENND4AQ7Z401 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
DENND4AQ7Z401 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
DENND4AQ7Z401 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
DENND4AQ7Z401 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
DENND4AQ7Z401 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
DENND4AQ7Z401 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
DENND4AQ7Z401 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.86■■■□□ 2.05
DENND4AQ7Z401 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.86■■■□□ 2.05
DENND4AQ7Z401 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
DENND4AQ7Z401 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.84■■■□□ 2.05
DENND4AQ7Z401 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
DENND4AQ7Z401 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
DENND4AQ7Z401 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
DENND4AQ7Z401 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.82■■■□□ 2.04
DENND4AQ7Z401 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.82■■■□□ 2.04
DENND4AQ7Z401 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.81■■■□□ 2.04
DENND4AQ7Z401 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
DENND4AQ7Z401 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.8■■■□□ 2.04
DENND4AQ7Z401 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.8■■■□□ 2.04
DENND4AQ7Z401 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
DENND4AQ7Z401 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.78■■■□□ 2.04
DENND4AQ7Z401 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.78■■■□□ 2.04
DENND4AQ7Z401 DUX4L13-201ENST00000554103 1267 ntBASIC27.78■■■□□ 2.04
DENND4AQ7Z401 DUX4L15-201ENST00000611059 1267 ntBASIC27.78■■■□□ 2.04
DENND4AQ7Z401 DUX4L23-201ENST00000615195 1269 ntBASIC27.78■■■□□ 2.04
DENND4AQ7Z401 DUX4L24-201ENST00000617576 1269 ntBASIC27.78■■■□□ 2.04
DENND4AQ7Z401 DUX4L22-201ENST00000618238 1269 ntBASIC27.78■■■□□ 2.04
DENND4AQ7Z401 DUX4L20-201ENST00000619712 1269 ntBASIC27.78■■■□□ 2.04
DENND4AQ7Z401 DUX4L21-201ENST00000622058 1269 ntBASIC27.78■■■□□ 2.04
DENND4AQ7Z401 DUX4L10-201ENST00000622460 1267 ntBASIC27.78■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms