Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CDPF1Q6NVV7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
CDPF1Q6NVV7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CDPF1Q6NVV7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDPF1Q6NVV7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDPF1Q6NVV7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDPF1Q6NVV7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CDPF1Q6NVV7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CDPF1Q6NVV7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDPF1Q6NVV7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDPF1Q6NVV7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDPF1Q6NVV7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDPF1Q6NVV7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDPF1Q6NVV7 AC142086.6-201ENST00000621154 1765 ntBASIC20.27■□□□□ 0.84
CDPF1Q6NVV7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.27■□□□□ 0.84
CDPF1Q6NVV7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDPF1Q6NVV7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CDPF1Q6NVV7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDPF1Q6NVV7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDPF1Q6NVV7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CDPF1Q6NVV7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.25■□□□□ 0.83
CDPF1Q6NVV7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.25■□□□□ 0.83
CDPF1Q6NVV7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDPF1Q6NVV7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDPF1Q6NVV7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDPF1Q6NVV7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.24■□□□□ 0.83
CDPF1Q6NVV7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDPF1Q6NVV7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDPF1Q6NVV7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDPF1Q6NVV7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDPF1Q6NVV7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDPF1Q6NVV7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDPF1Q6NVV7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDPF1Q6NVV7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDPF1Q6NVV7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.21■□□□□ 0.83
CDPF1Q6NVV7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDPF1Q6NVV7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDPF1Q6NVV7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDPF1Q6NVV7 AC006077.2-201ENST00000623591 457 ntBASIC20.2■□□□□ 0.82
CDPF1Q6NVV7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDPF1Q6NVV7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDPF1Q6NVV7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.19■□□□□ 0.82
CDPF1Q6NVV7 AC145285.7-201ENST00000614819 1539 ntBASIC20.19■□□□□ 0.82
CDPF1Q6NVV7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDPF1Q6NVV7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDPF1Q6NVV7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDPF1Q6NVV7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDPF1Q6NVV7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDPF1Q6NVV7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDPF1Q6NVV7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.17■□□□□ 0.82
CDPF1Q6NVV7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDPF1Q6NVV7 ZNRF2P1-201ENST00000441407 443 ntBASIC20.16■□□□□ 0.82
CDPF1Q6NVV7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDPF1Q6NVV7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDPF1Q6NVV7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDPF1Q6NVV7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDPF1Q6NVV7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CDPF1Q6NVV7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.15■□□□□ 0.82
CDPF1Q6NVV7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.15■□□□□ 0.82
CDPF1Q6NVV7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.14■□□□□ 0.82
CDPF1Q6NVV7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDPF1Q6NVV7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDPF1Q6NVV7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDPF1Q6NVV7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDPF1Q6NVV7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CDPF1Q6NVV7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CDPF1Q6NVV7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDPF1Q6NVV7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDPF1Q6NVV7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDPF1Q6NVV7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.09■□□□□ 0.81
CDPF1Q6NVV7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.09■□□□□ 0.81
CDPF1Q6NVV7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDPF1Q6NVV7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.09■□□□□ 0.81
CDPF1Q6NVV7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDPF1Q6NVV7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CDPF1Q6NVV7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDPF1Q6NVV7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.07■□□□□ 0.8
CDPF1Q6NVV7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDPF1Q6NVV7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDPF1Q6NVV7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDPF1Q6NVV7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDPF1Q6NVV7 AC015813.7-201ENST00000623294 581 ntBASIC20.05■□□□□ 0.8
CDPF1Q6NVV7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDPF1Q6NVV7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDPF1Q6NVV7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDPF1Q6NVV7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDPF1Q6NVV7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDPF1Q6NVV7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDPF1Q6NVV7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDPF1Q6NVV7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDPF1Q6NVV7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDPF1Q6NVV7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.02■□□□□ 0.8
CDPF1Q6NVV7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.02■□□□□ 0.79
CDPF1Q6NVV7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CDPF1Q6NVV7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDPF1Q6NVV7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDPF1Q6NVV7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDPF1Q6NVV7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDPF1Q6NVV7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDPF1Q6NVV7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms