Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDCP2Q5VXM1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CDCP2Q5VXM1 MIR3648-2-201ENST00000581792 180 ntBASIC25.86■■□□□ 1.73
CDCP2Q5VXM1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CDCP2Q5VXM1 MIR3648-1-201ENST00000615959 180 ntBASIC25.86■■□□□ 1.73
CDCP2Q5VXM1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDCP2Q5VXM1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDCP2Q5VXM1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.85■■□□□ 1.73
CDCP2Q5VXM1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.85■■□□□ 1.73
CDCP2Q5VXM1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDCP2Q5VXM1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDCP2Q5VXM1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.83■■□□□ 1.73
CDCP2Q5VXM1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.72
CDCP2Q5VXM1 AC016575.1-201ENST00000607026 382 ntBASIC25.82■■□□□ 1.72
CDCP2Q5VXM1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CDCP2Q5VXM1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.81■■□□□ 1.72
CDCP2Q5VXM1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.81■■□□□ 1.72
CDCP2Q5VXM1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDCP2Q5VXM1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDCP2Q5VXM1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CDCP2Q5VXM1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.8■■□□□ 1.72
CDCP2Q5VXM1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDCP2Q5VXM1 LINC01971-201ENST00000617888 1048 ntBASIC25.79■■□□□ 1.72
CDCP2Q5VXM1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDCP2Q5VXM1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDCP2Q5VXM1 DUX4L11-201ENST00000611504 1267 ntBASIC25.78■■□□□ 1.72
CDCP2Q5VXM1 DUX4L12-201ENST00000614593 1267 ntBASIC25.78■■□□□ 1.72
CDCP2Q5VXM1 DUX4L14-201ENST00000621227 1267 ntBASIC25.78■■□□□ 1.72
CDCP2Q5VXM1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDCP2Q5VXM1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDCP2Q5VXM1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.77■■□□□ 1.72
CDCP2Q5VXM1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.77■■□□□ 1.72
CDCP2Q5VXM1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDCP2Q5VXM1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.77■■□□□ 1.72
CDCP2Q5VXM1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDCP2Q5VXM1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDCP2Q5VXM1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDCP2Q5VXM1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDCP2Q5VXM1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
CDCP2Q5VXM1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDCP2Q5VXM1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.74■■□□□ 1.71
CDCP2Q5VXM1 CR559946.2-201ENST00000623684 991 ntBASIC25.74■■□□□ 1.71
CDCP2Q5VXM1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CDCP2Q5VXM1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.72■■□□□ 1.71
CDCP2Q5VXM1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CDCP2Q5VXM1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDCP2Q5VXM1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.7■■□□□ 1.7
CDCP2Q5VXM1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDCP2Q5VXM1 HSD17B1P1-201ENST00000590052 955 ntBASIC25.69■■□□□ 1.7
CDCP2Q5VXM1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDCP2Q5VXM1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDCP2Q5VXM1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDCP2Q5VXM1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDCP2Q5VXM1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.65■■□□□ 1.7
CDCP2Q5VXM1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDCP2Q5VXM1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDCP2Q5VXM1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.64■■□□□ 1.7
CDCP2Q5VXM1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
CDCP2Q5VXM1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CDCP2Q5VXM1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.64■■□□□ 1.69
CDCP2Q5VXM1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDCP2Q5VXM1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDCP2Q5VXM1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CDCP2Q5VXM1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.62■■□□□ 1.69
CDCP2Q5VXM1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.62■■□□□ 1.69
CDCP2Q5VXM1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDCP2Q5VXM1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.61■■□□□ 1.69
CDCP2Q5VXM1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDCP2Q5VXM1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.61■■□□□ 1.69
CDCP2Q5VXM1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDCP2Q5VXM1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CDCP2Q5VXM1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.57■■□□□ 1.68
CDCP2Q5VXM1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.57■■□□□ 1.68
CDCP2Q5VXM1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDCP2Q5VXM1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDCP2Q5VXM1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CDCP2Q5VXM1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
CDCP2Q5VXM1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDCP2Q5VXM1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDCP2Q5VXM1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDCP2Q5VXM1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDCP2Q5VXM1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
CDCP2Q5VXM1 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.53■■□□□ 1.68
CDCP2Q5VXM1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.53■■□□□ 1.68
CDCP2Q5VXM1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDCP2Q5VXM1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDCP2Q5VXM1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDCP2Q5VXM1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDCP2Q5VXM1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.51■■□□□ 1.67
CDCP2Q5VXM1 DUX4L13-201ENST00000554103 1267 ntBASIC25.51■■□□□ 1.67
CDCP2Q5VXM1 DUX4L15-201ENST00000611059 1267 ntBASIC25.51■■□□□ 1.67
CDCP2Q5VXM1 DUX4L23-201ENST00000615195 1269 ntBASIC25.51■■□□□ 1.67
CDCP2Q5VXM1 DUX4L24-201ENST00000617576 1269 ntBASIC25.51■■□□□ 1.67
CDCP2Q5VXM1 DUX4L22-201ENST00000618238 1269 ntBASIC25.51■■□□□ 1.67
CDCP2Q5VXM1 DUX4L20-201ENST00000619712 1269 ntBASIC25.51■■□□□ 1.67
CDCP2Q5VXM1 DUX4L21-201ENST00000622058 1269 ntBASIC25.51■■□□□ 1.67
CDCP2Q5VXM1 DUX4L10-201ENST00000622460 1267 ntBASIC25.51■■□□□ 1.67
CDCP2Q5VXM1 DUX4L25-201ENST00000624915 1269 ntBASIC25.51■■□□□ 1.67
CDCP2Q5VXM1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDCP2Q5VXM1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms