Protein–RNA interactions for Protein: Q5VVX9

UBE2U, Ubiquitin-conjugating enzyme E2 U, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2UQ5VVX9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
UBE2UQ5VVX9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
UBE2UQ5VVX9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
UBE2UQ5VVX9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
UBE2UQ5VVX9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.06■■□□□ 1.44
UBE2UQ5VVX9 AC135731.1-201ENST00000569415 2548 ntBASIC24.06■■□□□ 1.44
UBE2UQ5VVX9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
UBE2UQ5VVX9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
UBE2UQ5VVX9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
UBE2UQ5VVX9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
UBE2UQ5VVX9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
UBE2UQ5VVX9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
UBE2UQ5VVX9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.04■■□□□ 1.44
UBE2UQ5VVX9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
UBE2UQ5VVX9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
UBE2UQ5VVX9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
UBE2UQ5VVX9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
UBE2UQ5VVX9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.03■■□□□ 1.44
UBE2UQ5VVX9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
UBE2UQ5VVX9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
UBE2UQ5VVX9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24■■□□□ 1.43
UBE2UQ5VVX9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
UBE2UQ5VVX9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
UBE2UQ5VVX9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
UBE2UQ5VVX9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
UBE2UQ5VVX9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
UBE2UQ5VVX9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
UBE2UQ5VVX9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
UBE2UQ5VVX9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
UBE2UQ5VVX9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
UBE2UQ5VVX9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
UBE2UQ5VVX9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
UBE2UQ5VVX9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.96■■□□□ 1.43
UBE2UQ5VVX9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
UBE2UQ5VVX9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.96■■□□□ 1.43
UBE2UQ5VVX9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
UBE2UQ5VVX9 AL121749.1-202ENST00000609313 2153 ntBASIC23.93■■□□□ 1.42
UBE2UQ5VVX9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBE2UQ5VVX9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBE2UQ5VVX9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBE2UQ5VVX9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBE2UQ5VVX9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBE2UQ5VVX9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBE2UQ5VVX9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBE2UQ5VVX9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UBE2UQ5VVX9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBE2UQ5VVX9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.91■■□□□ 1.42
UBE2UQ5VVX9 AL135925.1-201ENST00000605920 1701 ntBASIC23.91■■□□□ 1.42
UBE2UQ5VVX9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
UBE2UQ5VVX9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
UBE2UQ5VVX9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.89■■□□□ 1.42
UBE2UQ5VVX9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
UBE2UQ5VVX9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBE2UQ5VVX9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
UBE2UQ5VVX9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
UBE2UQ5VVX9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBE2UQ5VVX9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
UBE2UQ5VVX9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
UBE2UQ5VVX9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
UBE2UQ5VVX9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBE2UQ5VVX9 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.86■■□□□ 1.41
UBE2UQ5VVX9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE2UQ5VVX9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC23.84■■□□□ 1.41
UBE2UQ5VVX9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
UBE2UQ5VVX9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
UBE2UQ5VVX9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
UBE2UQ5VVX9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBE2UQ5VVX9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE2UQ5VVX9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.83■■□□□ 1.4
UBE2UQ5VVX9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
UBE2UQ5VVX9 DRD5P2-201ENST00000421395 2012 ntBASIC23.82■■□□□ 1.4
UBE2UQ5VVX9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.82■■□□□ 1.4
UBE2UQ5VVX9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBE2UQ5VVX9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
UBE2UQ5VVX9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
UBE2UQ5VVX9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE2UQ5VVX9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE2UQ5VVX9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE2UQ5VVX9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.79■■□□□ 1.4
UBE2UQ5VVX9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBE2UQ5VVX9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
UBE2UQ5VVX9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
UBE2UQ5VVX9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.78■■□□□ 1.4
UBE2UQ5VVX9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBE2UQ5VVX9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.78■■□□□ 1.4
UBE2UQ5VVX9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE2UQ5VVX9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE2UQ5VVX9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE2UQ5VVX9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE2UQ5VVX9 AL139393.2-201ENST00000608721 2025 ntBASIC23.76■■□□□ 1.39
UBE2UQ5VVX9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE2UQ5VVX9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE2UQ5VVX9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE2UQ5VVX9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE2UQ5VVX9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
UBE2UQ5VVX9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE2UQ5VVX9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE2UQ5VVX9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE2UQ5VVX9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UBE2UQ5VVX9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms