Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LRRK2Q5S007 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LRRK2Q5S007 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LRRK2Q5S007 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
LRRK2Q5S007 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
LRRK2Q5S007 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRK2Q5S007 RNF126P1-201ENST00000567452 1320 ntBASIC24.07■■□□□ 1.44
LRRK2Q5S007 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRK2Q5S007 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.06■■□□□ 1.44
LRRK2Q5S007 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.05■■□□□ 1.44
LRRK2Q5S007 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRK2Q5S007 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
LRRK2Q5S007 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.04■■□□□ 1.44
LRRK2Q5S007 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.03■■□□□ 1.44
LRRK2Q5S007 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRK2Q5S007 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.01■■□□□ 1.43
LRRK2Q5S007 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRRK2Q5S007 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRRK2Q5S007 AC108673.1-201ENST00000510422 1159 ntBASIC24■■□□□ 1.43
LRRK2Q5S007 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRRK2Q5S007 DUX4L13-201ENST00000554103 1267 ntBASIC23.99■■□□□ 1.43
LRRK2Q5S007 DUX4L15-201ENST00000611059 1267 ntBASIC23.99■■□□□ 1.43
LRRK2Q5S007 DUX4L23-201ENST00000615195 1269 ntBASIC23.99■■□□□ 1.43
LRRK2Q5S007 DUX4L24-201ENST00000617576 1269 ntBASIC23.99■■□□□ 1.43
LRRK2Q5S007 DUX4L22-201ENST00000618238 1269 ntBASIC23.99■■□□□ 1.43
LRRK2Q5S007 DUX4L20-201ENST00000619712 1269 ntBASIC23.99■■□□□ 1.43
LRRK2Q5S007 DUX4L21-201ENST00000622058 1269 ntBASIC23.99■■□□□ 1.43
LRRK2Q5S007 DUX4L10-201ENST00000622460 1267 ntBASIC23.99■■□□□ 1.43
LRRK2Q5S007 DUX4L25-201ENST00000624915 1269 ntBASIC23.99■■□□□ 1.43
LRRK2Q5S007 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRRK2Q5S007 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LRRK2Q5S007 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
LRRK2Q5S007 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LRRK2Q5S007 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LRRK2Q5S007 MIR6090-201ENST00000622481 60 ntBASIC23.95■■□□□ 1.42
LRRK2Q5S007 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LRRK2Q5S007 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LRRK2Q5S007 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LRRK2Q5S007 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRRK2Q5S007 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.93■■□□□ 1.42
LRRK2Q5S007 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.92■■□□□ 1.42
LRRK2Q5S007 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LRRK2Q5S007 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.92■■□□□ 1.42
LRRK2Q5S007 WASH5P-204ENST00000632292 975 ntBASIC23.92■■□□□ 1.42
LRRK2Q5S007 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
LRRK2Q5S007 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.92■■□□□ 1.42
LRRK2Q5S007 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.92■■□□□ 1.42
LRRK2Q5S007 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRK2Q5S007 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.9■■□□□ 1.42
LRRK2Q5S007 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
LRRK2Q5S007 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
LRRK2Q5S007 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LRRK2Q5S007 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
LRRK2Q5S007 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
LRRK2Q5S007 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.87■■□□□ 1.41
LRRK2Q5S007 NTF6A-201ENST00000591175 560 ntBASIC23.87■■□□□ 1.41
LRRK2Q5S007 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRRK2Q5S007 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRRK2Q5S007 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.85■■□□□ 1.41
LRRK2Q5S007 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRRK2Q5S007 AC012354.3-201ENST00000623734 483 ntBASIC23.85■■□□□ 1.41
LRRK2Q5S007 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRRK2Q5S007 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.83■■□□□ 1.41
LRRK2Q5S007 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRRK2Q5S007 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRK2Q5S007 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
LRRK2Q5S007 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRK2Q5S007 GPX1-201ENST00000419349 1106 ntBASIC23.81■■□□□ 1.4
LRRK2Q5S007 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRK2Q5S007 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRK2Q5S007 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.8■■□□□ 1.4
LRRK2Q5S007 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRK2Q5S007 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.79■■□□□ 1.4
LRRK2Q5S007 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRK2Q5S007 AC018358.1-201ENST00000631079 1402 ntBASIC23.78■■□□□ 1.4
LRRK2Q5S007 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRK2Q5S007 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRK2Q5S007 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRK2Q5S007 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRK2Q5S007 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRK2Q5S007 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.77■■□□□ 1.4
LRRK2Q5S007 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRK2Q5S007 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.77■■□□□ 1.4
LRRK2Q5S007 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRK2Q5S007 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRK2Q5S007 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.76■■□□□ 1.39
LRRK2Q5S007 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRK2Q5S007 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
LRRK2Q5S007 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LRRK2Q5S007 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
LRRK2Q5S007 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRK2Q5S007 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRRK2Q5S007 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRK2Q5S007 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.72■■□□□ 1.39
LRRK2Q5S007 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.72■■□□□ 1.39
LRRK2Q5S007 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
LRRK2Q5S007 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRK2Q5S007 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
LRRK2Q5S007 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LRRK2Q5S007 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms