Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 SMM1YNR015W 1155 nt9.25□□□□□ -0.93
NPL3Q01560 YPL251WYPL251W 303 nt9.25□□□□□ -0.93
NPL3Q01560 BRR1YPR057W 1026 nt9.25□□□□□ -0.93
NPL3Q01560 RIM8YGL045W 1629 nt9.23□□□□□ -0.93 RIP-Chip
NPL3Q01560 MEP3YPR138C 1470 nt9.23□□□□□ -0.93
NPL3Q01560 UGA4YDL210W 1716 nt9.23□□□□□ -0.93
NPL3Q01560 LEU9YOR108W 1815 nt9.21□□□□□ -0.93
NPL3Q01560 SHY1YGR112W 1170 nt9.21□□□□□ -0.94 RIP-Chip
NPL3Q01560 ZRT3YKL175W 1512 nt9.21□□□□□ -0.94
NPL3Q01560 PRY1YJL079C 900 nt9.2□□□□□ -0.94
NPL3Q01560 YMR103CYMR103C 363 nt9.2□□□□□ -0.94
NPL3Q01560 ARO7YPR060C 771 nt9.2□□□□□ -0.94
NPL3Q01560 LSB3YFR024C-A 1380 nt9.2□□□□□ -0.94
NPL3Q01560 YEL009C-AYEL009C-A 408 nt9.19□□□□□ -0.94
NPL3Q01560 ADH1YOL086C 1047 nt9.18□□□□□ -0.94
NPL3Q01560 YJL195CYJL195C 702 nt9.17□□□□□ -0.94
NPL3Q01560 GND2YGR256W 1479 nt9.16□□□□□ -0.94
NPL3Q01560 FUN14YAL008W 597 nt9.16□□□□□ -0.94
NPL3Q01560 TRT2tT(CGU)K 72 nt9.15□□□□□ -0.94
NPL3Q01560 SAM2YDR502C 1155 nt9.14□□□□□ -0.95
NPL3Q01560 URA6YKL024C 615 nt9.13□□□□□ -0.95
NPL3Q01560 RPC82YPR190C 1965 nt9.13□□□□□ -0.95
NPL3Q01560 MCM5YLR274W 2328 nt9.13□□□□□ -0.95
NPL3Q01560 ADH7YCR105W 1086 nt9.12□□□□□ -0.95
NPL3Q01560 VRG4YGL225W 1014 nt9.12□□□□□ -0.95
NPL3Q01560 YPL041CYPL041C 624 nt9.12□□□□□ -0.95
NPL3Q01560 UFO1YML088W 2007 nt9.12□□□□□ -0.95
NPL3Q01560 SSN3YPL042C 1668 nt9.11□□□□□ -0.95
NPL3Q01560 OYE3YPL171C 1203 nt9.11□□□□□ -0.95
NPL3Q01560 RIB2YOL066C 1776 nt9.11□□□□□ -0.95
NPL3Q01560 YGL114WYGL114W 2178 nt9.1□□□□□ -0.95
NPL3Q01560 NAS6YGR232W 687 nt9.1□□□□□ -0.95
NPL3Q01560 PAU15YIR041W 375 nt9.09□□□□□ -0.95
NPL3Q01560 NUC1YJL208C 990 nt9.09□□□□□ -0.95
NPL3Q01560 PET8YNL003C 855 nt9.09□□□□□ -0.95 RIP-Chip
NPL3Q01560 LSB5YCL034W 1065 nt9.09□□□□□ -0.95
NPL3Q01560 HXT12YIL170W 1374 nt9.09□□□□□ -0.95
NPL3Q01560 MET2YNL277W 1461 nt9.08□□□□□ -0.96
NPL3Q01560 YDR306CYDR306C 1437 nt9.07□□□□□ -0.96
NPL3Q01560 SEC61YLR378C 1443 nt9.07□□□□□ -0.96
NPL3Q01560 CSM1YCR086W 573 nt9.07□□□□□ -0.96
NPL3Q01560 YJL055WYJL055W 738 nt9.07□□□□□ -0.96
NPL3Q01560 COG1YGL223C 1254 nt9.06□□□□□ -0.96 RIP-Chip
NPL3Q01560 YJL067WYJL067W 351 nt9.06□□□□□ -0.96
NPL3Q01560 BNI5YNL166C 1347 nt9.05□□□□□ -0.96
NPL3Q01560 PUS7YOR243C 2031 nt9.04□□□□□ -0.96
NPL3Q01560 PHO23YNL097C 993 nt9.04□□□□□ -0.96 RIP-Chip
NPL3Q01560 MUP1YGR055W 1725 nt9.03□□□□□ -0.96
NPL3Q01560 ESS1YJR017C 513 nt9.03□□□□□ -0.96 RIP-Chip
NPL3Q01560 YEL008WYEL008W 381 nt9.02□□□□□ -0.97
NPL3Q01560 OXA1YER154W 1209 nt9.02□□□□□ -0.97
NPL3Q01560 MSC1YML128C 1542 nt9.01□□□□□ -0.97
NPL3Q01560 MAE1YKL029C 2010 nt9.01□□□□□ -0.97
NPL3Q01560 RPT5YOR117W 1305 nt9.01□□□□□ -0.97
NPL3Q01560 URH1YDR400W 1023 nt9□□□□□ -0.97
NPL3Q01560 YER188WYER188W 720 nt9□□□□□ -0.97
NPL3Q01560 YJL118WYJL118W 660 nt9□□□□□ -0.97 RIP-Chip
NPL3Q01560 CWC15YDR163W 528 nt8.99□□□□□ -0.97 RIP-Chip
NPL3Q01560 RAS2YNL098C 969 nt8.97□□□□□ -0.97
NPL3Q01560 PUP1YOR157C 786 nt8.97□□□□□ -0.97
NPL3Q01560 RIB7YBR153W 735 nt8.97□□□□□ -0.97
NPL3Q01560 SFP1YLR403W 2052 nt8.95□□□□□ -0.98
NPL3Q01560 RSC8YFR037C 1674 nt8.95□□□□□ -0.98
NPL3Q01560 LCP5YER127W 1074 nt8.95□□□□□ -0.98
NPL3Q01560 GPN2YOR262W 1044 nt8.95□□□□□ -0.98
NPL3Q01560 FUB1YCR076C 753 nt8.94□□□□□ -0.98 RIP-Chip
NPL3Q01560 DLD2YDL178W 1593 nt8.94□□□□□ -0.98
NPL3Q01560 CPD1YGR247W 720 nt8.93□□□□□ -0.98 RIP-Chip
NPL3Q01560 SPP2YOR148C 558 nt8.93□□□□□ -0.98
NPL3Q01560 SAM3YPL274W 1764 nt8.93□□□□□ -0.98
NPL3Q01560 FLR1YBR008C 1647 nt8.92□□□□□ -0.98
NPL3Q01560 GAL3YDR009W 1563 nt8.92□□□□□ -0.98
NPL3Q01560 YPS3YLR121C 1527 nt8.91□□□□□ -0.98 RIP-Chip
NPL3Q01560 FMS1YMR020W 1527 nt8.91□□□□□ -0.98
NPL3Q01560 FTH1YBR207W 1398 nt8.91□□□□□ -0.98
NPL3Q01560 OSH7YHR001W 1314 nt8.91□□□□□ -0.98
NPL3Q01560 OYE2YHR179W 1203 nt8.91□□□□□ -0.98
NPL3Q01560 NPP1YCR026C 2229 nt8.89□□□□□ -0.99
NPL3Q01560 TPS1YBR126C 1488 nt8.89□□□□□ -0.99
NPL3Q01560 CCT5YJR064W 1689 nt8.88□□□□□ -0.99
NPL3Q01560 HMG2YLR450W 3138 nt8.87□□□□□ -0.99
NPL3Q01560 AI5_BETAQ0075 1065 nt8.87□□□□□ -0.99
NPL3Q01560 tS(GCU)LtS(GCU)L 80 nt8.87□□□□□ -0.99
NPL3Q01560 HOL1YNR055C 1761 nt8.86□□□□□ -0.99
NPL3Q01560 NAP1YKR048C 1254 nt8.86□□□□□ -0.99
NPL3Q01560 EAF3YPR023C 1206 nt8.86□□□□□ -0.99
NPL3Q01560 VPS62YGR141W 1404 nt8.86□□□□□ -0.99
NPL3Q01560 FAF1YIL019W 1041 nt8.85□□□□□ -0.99
NPL3Q01560 YTH1YPR107C 627 nt8.85□□□□□ -0.99 RIP-Chip
NPL3Q01560 SEN2YLR105C 1134 nt8.84□□□□□ -0.99 RIP-Chip
NPL3Q01560 THI72YOR192C 1800 nt8.84□□□□□ -0.99
NPL3Q01560 ACO2YJL200C 2370 nt8.84□□□□□ -0.99
NPL3Q01560 HIS2YFR025C 1008 nt8.83□□□□□ -1 RIP-Chip
NPL3Q01560 YIL100C-AYIL100C-A 339 nt8.83□□□□□ -1
NPL3Q01560 YNL024CYNL024C 741 nt8.83□□□□□ -1
NPL3Q01560 SOL2YCR073W-A 948 nt8.82□□□□□ -1
NPL3Q01560 YMR209CYMR209C 1374 nt8.82□□□□□ -1
NPL3Q01560 YLR122CYLR122C 378 nt8.81□□□□□ -1
NPL3Q01560 TAF13YML098W 504 nt8.81□□□□□ -1 RIP-Chip
NPL3Q01560 HEM13YDR044W 987 nt8.8□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms