Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
PPP4CP60510 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PPP4CP60510 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
PPP4CP60510 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
PPP4CP60510 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.11■■■□□ 2.73
PPP4CP60510 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
PPP4CP60510 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PPP4CP60510 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
PPP4CP60510 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
PPP4CP60510 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.07■■■□□ 2.72
PPP4CP60510 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
PPP4CP60510 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PPP4CP60510 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.05■■■□□ 2.72
PPP4CP60510 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.05■■■□□ 2.72
PPP4CP60510 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
PPP4CP60510 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PPP4CP60510 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
PPP4CP60510 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.01■■■□□ 2.71
PPP4CP60510 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
PPP4CP60510 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
PPP4CP60510 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32■■■□□ 2.71
PPP4CP60510 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PPP4CP60510 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
PPP4CP60510 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.99■■■□□ 2.71
PPP4CP60510 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.99■■■□□ 2.71
PPP4CP60510 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.99■■■□□ 2.71
PPP4CP60510 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PPP4CP60510 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PPP4CP60510 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PPP4CP60510 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.98■■■□□ 2.71
PPP4CP60510 AC108673.1-201ENST00000510422 1159 ntBASIC31.96■■■□□ 2.71
PPP4CP60510 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PPP4CP60510 MIR6090-201ENST00000622481 60 ntBASIC31.96■■■□□ 2.71
PPP4CP60510 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.96■■■□□ 2.71
PPP4CP60510 MIR7108-201ENST00000614319 87 ntBASIC31.95■■■□□ 2.71
PPP4CP60510 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
PPP4CP60510 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
PPP4CP60510 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PPP4CP60510 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.91■■■□□ 2.7
PPP4CP60510 ZNRF2P2-203ENST00000454624 420 ntBASIC31.9■■■□□ 2.7
PPP4CP60510 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PPP4CP60510 DUX4L29-201ENST00000425409 679 ntBASIC31.89■■■□□ 2.7
PPP4CP60510 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
PPP4CP60510 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.88■■■□□ 2.69
PPP4CP60510 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.88■■■□□ 2.69
PPP4CP60510 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PPP4CP60510 AL161658.1-201ENST00000623641 1967 ntBASIC31.87■■■□□ 2.69
PPP4CP60510 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PPP4CP60510 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
PPP4CP60510 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
PPP4CP60510 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
PPP4CP60510 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.86■■■□□ 2.69
PPP4CP60510 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.86■■■□□ 2.69
PPP4CP60510 AC021231.2-201ENST00000594613 730 ntBASIC31.86■■■□□ 2.69
PPP4CP60510 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PPP4CP60510 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PPP4CP60510 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PPP4CP60510 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.83■■■□□ 2.69
PPP4CP60510 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PPP4CP60510 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
PPP4CP60510 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PPP4CP60510 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
PPP4CP60510 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PPP4CP60510 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PPP4CP60510 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.82■■■□□ 2.68
PPP4CP60510 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PPP4CP60510 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PPP4CP60510 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.81■■■□□ 2.68
PPP4CP60510 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PPP4CP60510 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.81■■■□□ 2.68
PPP4CP60510 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.81■■■□□ 2.68
PPP4CP60510 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PPP4CP60510 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
PPP4CP60510 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PPP4CP60510 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PPP4CP60510 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
PPP4CP60510 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PPP4CP60510 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.79■■■□□ 2.68
PPP4CP60510 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PPP4CP60510 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PPP4CP60510 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PPP4CP60510 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PPP4CP60510 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PPP4CP60510 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PPP4CP60510 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PPP4CP60510 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.77■■■□□ 2.68
PPP4CP60510 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.76■■■□□ 2.67
PPP4CP60510 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PPP4CP60510 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.75■■■□□ 2.67
PPP4CP60510 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PPP4CP60510 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
PPP4CP60510 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PPP4CP60510 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
PPP4CP60510 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.71■■■□□ 2.67
PPP4CP60510 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
PPP4CP60510 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
PPP4CP60510 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PPP4CP60510 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.66■■■□□ 2.66
PPP4CP60510 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PPP4CP60510 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms