Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CMC4P56277 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CMC4P56277 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CMC4P56277 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CMC4P56277 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CMC4P56277 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CMC4P56277 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CMC4P56277 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CMC4P56277 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.83■□□□□ 0.77
CMC4P56277 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.83■□□□□ 0.76
CMC4P56277 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CMC4P56277 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CMC4P56277 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.83■□□□□ 0.76
CMC4P56277 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CMC4P56277 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CMC4P56277 AL161658.1-201ENST00000623641 1967 ntBASIC19.82■□□□□ 0.76
CMC4P56277 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CMC4P56277 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CMC4P56277 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CMC4P56277 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.81■□□□□ 0.76
CMC4P56277 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CMC4P56277 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CMC4P56277 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CMC4P56277 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CMC4P56277 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.79■□□□□ 0.76
CMC4P56277 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMC4P56277 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.77■□□□□ 0.76
CMC4P56277 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CMC4P56277 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMC4P56277 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CMC4P56277 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CMC4P56277 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.75■□□□□ 0.75
CMC4P56277 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.74■□□□□ 0.75
CMC4P56277 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.74■□□□□ 0.75
CMC4P56277 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CMC4P56277 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CMC4P56277 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CMC4P56277 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CMC4P56277 DUX4L28-201ENST00000623687 678 ntBASIC19.73■□□□□ 0.75
CMC4P56277 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CMC4P56277 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMC4P56277 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CMC4P56277 AL162393.1-201ENST00000437852 946 ntBASIC19.72■□□□□ 0.75
CMC4P56277 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CMC4P56277 AC044849.2-201ENST00000606596 710 ntBASIC19.72■□□□□ 0.75
CMC4P56277 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMC4P56277 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CMC4P56277 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMC4P56277 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMC4P56277 AC108673.1-201ENST00000510422 1159 ntBASIC19.71■□□□□ 0.75
CMC4P56277 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.71■□□□□ 0.75
CMC4P56277 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CMC4P56277 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CMC4P56277 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CMC4P56277 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMC4P56277 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.7■□□□□ 0.74
CMC4P56277 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.7■□□□□ 0.74
CMC4P56277 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMC4P56277 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMC4P56277 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMC4P56277 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMC4P56277 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.68■□□□□ 0.74
CMC4P56277 AC087741.3-201ENST00000624270 1347 ntBASIC19.68■□□□□ 0.74
CMC4P56277 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CMC4P56277 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.68■□□□□ 0.74
CMC4P56277 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CMC4P56277 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CMC4P56277 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CMC4P56277 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CMC4P56277 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.67■□□□□ 0.74
CMC4P56277 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CMC4P56277 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CMC4P56277 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.65■□□□□ 0.74
CMC4P56277 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CMC4P56277 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
CMC4P56277 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.64■□□□□ 0.74
CMC4P56277 RPS2P35-201ENST00000443417 897 ntBASIC19.64■□□□□ 0.73
CMC4P56277 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CMC4P56277 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.63■□□□□ 0.73
CMC4P56277 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CMC4P56277 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CMC4P56277 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CMC4P56277 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMC4P56277 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.62■□□□□ 0.73
CMC4P56277 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.62■□□□□ 0.73
CMC4P56277 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CMC4P56277 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CMC4P56277 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CMC4P56277 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CMC4P56277 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CMC4P56277 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.6■□□□□ 0.73
CMC4P56277 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CMC4P56277 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.6■□□□□ 0.73
CMC4P56277 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CMC4P56277 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CMC4P56277 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.59■□□□□ 0.73
CMC4P56277 AL135925.1-201ENST00000605920 1701 ntBASIC19.59■□□□□ 0.73
CMC4P56277 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.58■□□□□ 0.73
CMC4P56277 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CMC4P56277 AC010864.1-201ENST00000609407 1511 ntBASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms