Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
HDGFP51858 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC38.86■■■■□ 3.81
HDGFP51858 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
HDGFP51858 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC38.85■■■■□ 3.81
HDGFP51858 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC38.85■■■■□ 3.81
HDGFP51858 LINC01971-201ENST00000617888 1048 ntBASIC38.85■■■■□ 3.81
HDGFP51858 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
HDGFP51858 DUX4L11-201ENST00000611504 1267 ntBASIC38.83■■■■□ 3.81
HDGFP51858 DUX4L12-201ENST00000614593 1267 ntBASIC38.83■■■■□ 3.81
HDGFP51858 DUX4L14-201ENST00000621227 1267 ntBASIC38.83■■■■□ 3.81
HDGFP51858 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC38.82■■■■□ 3.81
HDGFP51858 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC38.82■■■■□ 3.8
HDGFP51858 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC38.8■■■■□ 3.8
HDGFP51858 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC38.8■■■■□ 3.8
HDGFP51858 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC38.8■■■■□ 3.8
HDGFP51858 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC38.8■■■■□ 3.8
HDGFP51858 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC38.79■■■■□ 3.8
HDGFP51858 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
HDGFP51858 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
HDGFP51858 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC38.78■■■■□ 3.8
HDGFP51858 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC38.78■■■■□ 3.8
HDGFP51858 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
HDGFP51858 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC38.78■■■■□ 3.8
HDGFP51858 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC38.77■■■■□ 3.8
HDGFP51858 HSD17B1P1-201ENST00000590052 955 ntBASIC38.76■■■■□ 3.8
HDGFP51858 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
HDGFP51858 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
HDGFP51858 CR559946.2-201ENST00000623684 991 ntBASIC38.72■■■■□ 3.79
HDGFP51858 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC38.71■■■■□ 3.79
HDGFP51858 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
HDGFP51858 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC38.69■■■■□ 3.78
HDGFP51858 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
HDGFP51858 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC38.68■■■■□ 3.78
HDGFP51858 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
HDGFP51858 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC38.68■■■■□ 3.78
HDGFP51858 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC38.68■■■■□ 3.78
HDGFP51858 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC38.67■■■■□ 3.78
HDGFP51858 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
HDGFP51858 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC38.65■■■■□ 3.78
HDGFP51858 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
HDGFP51858 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
HDGFP51858 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC38.64■■■■□ 3.78
HDGFP51858 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC38.63■■■■□ 3.78
HDGFP51858 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
HDGFP51858 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
HDGFP51858 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC38.62■■■■□ 3.77
HDGFP51858 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
HDGFP51858 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC38.6■■■■□ 3.77
HDGFP51858 BRD4-212ENST00000630599 726 ntTSL 2 BASIC38.6■■■■□ 3.77
HDGFP51858 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC38.59■■■■□ 3.77
HDGFP51858 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
HDGFP51858 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
HDGFP51858 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC38.58■■■■□ 3.77
HDGFP51858 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC38.58■■■■□ 3.77
HDGFP51858 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
HDGFP51858 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC38.57■■■■□ 3.76
HDGFP51858 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
HDGFP51858 ABHD17AP3-201ENST00000503096 1137 ntBASIC38.54■■■■□ 3.76
HDGFP51858 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
HDGFP51858 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC38.53■■■■□ 3.76
HDGFP51858 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
HDGFP51858 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
HDGFP51858 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC38.49■■■■□ 3.75
HDGFP51858 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
HDGFP51858 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
HDGFP51858 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC38.46■■■■□ 3.75
HDGFP51858 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC38.43■■■■□ 3.74
HDGFP51858 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC38.43■■■■□ 3.74
HDGFP51858 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC38.42■■■■□ 3.74
HDGFP51858 DUX4L13-201ENST00000554103 1267 ntBASIC38.41■■■■□ 3.74
HDGFP51858 DUX4L15-201ENST00000611059 1267 ntBASIC38.41■■■■□ 3.74
HDGFP51858 DUX4L23-201ENST00000615195 1269 ntBASIC38.41■■■■□ 3.74
HDGFP51858 DUX4L24-201ENST00000617576 1269 ntBASIC38.41■■■■□ 3.74
HDGFP51858 DUX4L22-201ENST00000618238 1269 ntBASIC38.41■■■■□ 3.74
HDGFP51858 DUX4L20-201ENST00000619712 1269 ntBASIC38.41■■■■□ 3.74
HDGFP51858 DUX4L21-201ENST00000622058 1269 ntBASIC38.41■■■■□ 3.74
HDGFP51858 DUX4L10-201ENST00000622460 1267 ntBASIC38.41■■■■□ 3.74
HDGFP51858 DUX4L25-201ENST00000624915 1269 ntBASIC38.41■■■■□ 3.74
HDGFP51858 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
HDGFP51858 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC38.4■■■■□ 3.74
HDGFP51858 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
HDGFP51858 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC38.4■■■■□ 3.74
HDGFP51858 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC38.4■■■■□ 3.74
HDGFP51858 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
HDGFP51858 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC38.39■■■■□ 3.74
HDGFP51858 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
HDGFP51858 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC38.37■■■■□ 3.73
HDGFP51858 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC38.37■■■■□ 3.73
HDGFP51858 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC38.37■■■■□ 3.73
HDGFP51858 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC38.36■■■■□ 3.73
HDGFP51858 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC38.35■■■■□ 3.73
HDGFP51858 METRNL-202ENST00000570778 967 ntTSL 5 BASIC38.34■■■■□ 3.73
HDGFP51858 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC38.33■■■■□ 3.73
HDGFP51858 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC38.32■■■■□ 3.73
HDGFP51858 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC38.32■■■■□ 3.72
HDGFP51858 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
HDGFP51858 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC38.31■■■■□ 3.72
HDGFP51858 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC38.31■■■■□ 3.72
HDGFP51858 HES6-205ENST00000409356 528 ntTSL 2 BASIC38.29■■■■□ 3.72
HDGFP51858 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC38.29■■■■□ 3.72
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms