Protein–RNA interactions for Protein: P49792

RANBP2, E3 SUMO-protein ligase RanBP2, humanhuman

Known RBP Predictions only

Length 3,224 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP2P49792 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.89■■■□□ 2.38
RANBP2P49792 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
RANBP2P49792 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RANBP2P49792 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RANBP2P49792 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
RANBP2P49792 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RANBP2P49792 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.86■■■□□ 2.37
RANBP2P49792 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
RANBP2P49792 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RANBP2P49792 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RANBP2P49792 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RANBP2P49792 RNF126P1-201ENST00000567452 1320 ntBASIC29.83■■■□□ 2.37
RANBP2P49792 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.81■■■□□ 2.36
RANBP2P49792 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.81■■■□□ 2.36
RANBP2P49792 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RANBP2P49792 MIR6090-201ENST00000622481 60 ntBASIC29.8■■■□□ 2.36
RANBP2P49792 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RANBP2P49792 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RANBP2P49792 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
RANBP2P49792 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.78■■■□□ 2.36
RANBP2P49792 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RANBP2P49792 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RANBP2P49792 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.77■■■□□ 2.36
RANBP2P49792 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RANBP2P49792 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RANBP2P49792 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
RANBP2P49792 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RANBP2P49792 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RANBP2P49792 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.73■■■□□ 2.35
RANBP2P49792 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.73■■■□□ 2.35
RANBP2P49792 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
RANBP2P49792 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RANBP2P49792 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
RANBP2P49792 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.7■■■□□ 2.34
RANBP2P49792 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
RANBP2P49792 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RANBP2P49792 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.68■■■□□ 2.34
RANBP2P49792 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RANBP2P49792 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
RANBP2P49792 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L13-201ENST00000554103 1267 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L15-201ENST00000611059 1267 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L23-201ENST00000615195 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L24-201ENST00000617576 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L22-201ENST00000618238 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L20-201ENST00000619712 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L21-201ENST00000622058 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L10-201ENST00000622460 1267 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L25-201ENST00000624915 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 WASH5P-204ENST00000632292 975 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.66■■■□□ 2.34
RANBP2P49792 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RANBP2P49792 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.65■■■□□ 2.34
RANBP2P49792 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
RANBP2P49792 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
RANBP2P49792 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RANBP2P49792 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.62■■■□□ 2.33
RANBP2P49792 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RANBP2P49792 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.62■■■□□ 2.33
RANBP2P49792 NTF6A-201ENST00000591175 560 ntBASIC29.62■■■□□ 2.33
RANBP2P49792 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
RANBP2P49792 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RANBP2P49792 AC018358.1-201ENST00000631079 1402 ntBASIC29.61■■■□□ 2.33
RANBP2P49792 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
RANBP2P49792 GPX1-201ENST00000419349 1106 ntBASIC29.57■■■□□ 2.32
RANBP2P49792 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.57■■■□□ 2.32
RANBP2P49792 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RANBP2P49792 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
RANBP2P49792 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RANBP2P49792 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
RANBP2P49792 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RANBP2P49792 AC012354.3-201ENST00000623734 483 ntBASIC29.54■■■□□ 2.32
RANBP2P49792 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RANBP2P49792 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RANBP2P49792 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.53■■■□□ 2.32
RANBP2P49792 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RANBP2P49792 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
RANBP2P49792 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RANBP2P49792 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
RANBP2P49792 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.51■■■□□ 2.31
RANBP2P49792 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RANBP2P49792 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RANBP2P49792 AC108673.1-201ENST00000510422 1159 ntBASIC29.5■■■□□ 2.31
RANBP2P49792 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.5■■■□□ 2.31
RANBP2P49792 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.5■■■□□ 2.31
RANBP2P49792 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.5■■■□□ 2.31
RANBP2P49792 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.49■■■□□ 2.31
RANBP2P49792 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RANBP2P49792 AC019069.1-201ENST00000610008 1333 ntBASIC29.48■■■□□ 2.31
RANBP2P49792 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RANBP2P49792 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.45■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms