Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 YGR296C-AYGR296C-A 576 nt10.34□□□□□ -0.75
VPS53P47061 YML133W-AYML133W-A 576 nt10.34□□□□□ -0.75
VPS53P47061 YNL339W-AYNL339W-A 576 nt10.34□□□□□ -0.75
VPS53P47061 YPL283W-AYPL283W-A 576 nt10.34□□□□□ -0.75
VPS53P47061 ALD4YOR374W 1560 nt10.31□□□□□ -0.76
VPS53P47061 LIP1YMR298W 453 nt10.3□□□□□ -0.76
VPS53P47061 UGA4YDL210W 1716 nt10.3□□□□□ -0.76
VPS53P47061 CCT5YJR064W 1689 nt10.29□□□□□ -0.76
VPS53P47061 DBP1YPL119C 1854 nt10.29□□□□□ -0.76
VPS53P47061 RPC82YPR190C 1965 nt10.28□□□□□ -0.76
VPS53P47061 FRE6YLL051C 2139 nt10.27□□□□□ -0.77
VPS53P47061 YJL055WYJL055W 738 nt10.25□□□□□ -0.77
VPS53P47061 YJL064WYJL064W 396 nt10.25□□□□□ -0.77
VPS53P47061 TAF13YML098W 504 nt10.25□□□□□ -0.77
VPS53P47061 TIM44YIL022W 1296 nt10.24□□□□□ -0.77
VPS53P47061 YPL251WYPL251W 303 nt10.24□□□□□ -0.77
VPS53P47061 PAU19YMR325W 375 nt10.23□□□□□ -0.77
VPS53P47061 HXT1YHR094C 1713 nt10.23□□□□□ -0.77
VPS53P47061 YBL086CYBL086C 1401 nt10.23□□□□□ -0.77
VPS53P47061 INA1YLR413W 2028 nt10.23□□□□□ -0.77
VPS53P47061 RIM8YGL045W 1629 nt10.22□□□□□ -0.77
VPS53P47061 LEU9YOR108W 1815 nt10.21□□□□□ -0.77
VPS53P47061 HIF1YLL022C 1158 nt10.2□□□□□ -0.78
VPS53P47061 LSB5YCL034W 1065 nt10.2□□□□□ -0.78
VPS53P47061 THI72YOR192C 1800 nt10.19□□□□□ -0.78
VPS53P47061 BRR1YPR057W 1026 nt10.18□□□□□ -0.78
VPS53P47061 MEP3YPR138C 1470 nt10.17□□□□□ -0.78
VPS53P47061 RIB7YBR153W 735 nt10.16□□□□□ -0.78
VPS53P47061 CSM1YCR086W 573 nt10.15□□□□□ -0.78
VPS53P47061 NUC1YJL208C 990 nt10.14□□□□□ -0.79
VPS53P47061 YMR103CYMR103C 363 nt10.14□□□□□ -0.79
VPS53P47061 PAR32YDL173W 888 nt10.13□□□□□ -0.79
VPS53P47061 YJL118WYJL118W 660 nt10.13□□□□□ -0.79
VPS53P47061 TOA2YKL058W 369 nt10.13□□□□□ -0.79
VPS53P47061 SLG1YOR008C 1137 nt10.12□□□□□ -0.79
VPS53P47061 RPT5YOR117W 1305 nt10.11□□□□□ -0.79
VPS53P47061 MET8YBR213W 825 nt10.11□□□□□ -0.79
VPS53P47061 MUP1YGR055W 1725 nt10.1□□□□□ -0.79
VPS53P47061 GAL3YDR009W 1563 nt10.1□□□□□ -0.79
VPS53P47061 YGL114WYGL114W 2178 nt10.1□□□□□ -0.79
VPS53P47061 SHY1YGR112W 1170 nt10.09□□□□□ -0.79
VPS53P47061 YJR114WYJR114W 393 nt10.09□□□□□ -0.79
VPS53P47061 UFO1YML088W 2007 nt10.08□□□□□ -0.8
VPS53P47061 TRT2tT(CGU)K 72 nt10.08□□□□□ -0.8
VPS53P47061 RIB1YBL033C 1038 nt10.08□□□□□ -0.8
VPS53P47061 SSN3YPL042C 1668 nt10.07□□□□□ -0.8
VPS53P47061 GSF2YML048W 1212 nt10.07□□□□□ -0.8
VPS53P47061 YMR262WYMR262W 942 nt10.07□□□□□ -0.8
VPS53P47061 GND2YGR256W 1479 nt10.06□□□□□ -0.8
VPS53P47061 PHO23YNL097C 993 nt10.06□□□□□ -0.8
VPS53P47061 MHF1YOL086W-A 273 nt10.05□□□□□ -0.8
VPS53P47061 POT1YIL160C 1254 nt10.04□□□□□ -0.8
VPS53P47061 URA6YKL024C 615 nt10.03□□□□□ -0.8
VPS53P47061 TIP1YBR067C 633 nt10.03□□□□□ -0.8
VPS53P47061 BNI5YNL166C 1347 nt10.03□□□□□ -0.8
VPS53P47061 PAU21YOR394W 495 nt10.02□□□□□ -0.81
VPS53P47061 PAU22YPL282C 495 nt10.02□□□□□ -0.81
VPS53P47061 OXA1YER154W 1209 nt10.01□□□□□ -0.81
VPS53P47061 MSC1YML128C 1542 nt10.01□□□□□ -0.81
VPS53P47061 SAM3YPL274W 1764 nt10.01□□□□□ -0.81
VPS53P47061 SEC61YLR378C 1443 nt10□□□□□ -0.81
VPS53P47061 YIA6YIL006W 1122 nt10□□□□□ -0.81
VPS53P47061 ZRT3YKL175W 1512 nt10□□□□□ -0.81
VPS53P47061 MAE1YKL029C 2010 nt10□□□□□ -0.81
VPS53P47061 TUB4YLR212C 1422 nt9.99□□□□□ -0.81
VPS53P47061 OYE3YPL171C 1203 nt9.99□□□□□ -0.81
VPS53P47061 SAM2YDR502C 1155 nt9.98□□□□□ -0.81
VPS53P47061 SNZ1YMR096W 894 nt9.98□□□□□ -0.81
VPS53P47061 YPR126CYPR126C 309 nt9.98□□□□□ -0.81
VPS53P47061 HOL1YNR055C 1761 nt9.98□□□□□ -0.81
VPS53P47061 SOD2YHR008C 702 nt9.96□□□□□ -0.82
VPS53P47061 ARO7YPR060C 771 nt9.95□□□□□ -0.82
VPS53P47061 IML3YBR107C 738 nt9.95□□□□□ -0.82
VPS53P47061 ERG6YML008C 1152 nt9.94□□□□□ -0.82
VPS53P47061 PET8YNL003C 855 nt9.94□□□□□ -0.82
VPS53P47061 CTI6YPL181W 1521 nt9.93□□□□□ -0.82
VPS53P47061 OYE2YHR179W 1203 nt9.93□□□□□ -0.82
VPS53P47061 TPS1YBR126C 1488 nt9.91□□□□□ -0.82
VPS53P47061 DAK2YFL053W 1776 nt9.91□□□□□ -0.82
VPS53P47061 FUB1YCR076C 753 nt9.91□□□□□ -0.82
VPS53P47061 YER188WYER188W 720 nt9.91□□□□□ -0.82
VPS53P47061 YNL024CYNL024C 741 nt9.91□□□□□ -0.82
VPS53P47061 RAS2YNL098C 969 nt9.91□□□□□ -0.82
VPS53P47061 YCP4YCR004C 744 nt9.89□□□□□ -0.83
VPS53P47061 APS2YJR058C 444 nt9.87□□□□□ -0.83
VPS53P47061 MET2YNL277W 1461 nt9.85□□□□□ -0.83
VPS53P47061 DLD2YDL178W 1593 nt9.85□□□□□ -0.83
VPS53P47061 YJL067WYJL067W 351 nt9.85□□□□□ -0.83
VPS53P47061 EAF3YPR023C 1206 nt9.85□□□□□ -0.83
VPS53P47061 NIF3YGL221C 867 nt9.84□□□□□ -0.83
VPS53P47061 FLR1YBR008C 1647 nt9.84□□□□□ -0.83
VPS53P47061 ACO2YJL200C 2370 nt9.83□□□□□ -0.84
VPS53P47061 IGD1YFR017C 588 nt9.81□□□□□ -0.84
VPS53P47061 QDR2YIL121W 1629 nt9.81□□□□□ -0.84
VPS53P47061 POP2YNR052C 1302 nt9.81□□□□□ -0.84
VPS53P47061 YPS3YLR121C 1527 nt9.8□□□□□ -0.84
VPS53P47061 RSC8YFR037C 1674 nt9.8□□□□□ -0.84
VPS53P47061 SFP1YLR403W 2052 nt9.79□□□□□ -0.84
VPS53P47061 YMR209CYMR209C 1374 nt9.79□□□□□ -0.84
VPS53P47061 FMS1YMR020W 1527 nt9.79□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 8.9 ms