Protein–RNA interactions for Protein: P29373

CRABP2, Cellular retinoic acid-binding protein 2, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRABP2P29373 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CRABP2P29373 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CRABP2P29373 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CRABP2P29373 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CRABP2P29373 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.5■■□□□ 1.83
CRABP2P29373 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CRABP2P29373 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CRABP2P29373 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CRABP2P29373 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CRABP2P29373 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.48■■□□□ 1.83
CRABP2P29373 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CRABP2P29373 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.48■■□□□ 1.83
CRABP2P29373 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CRABP2P29373 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CRABP2P29373 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CRABP2P29373 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CRABP2P29373 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CRABP2P29373 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
CRABP2P29373 AC139426.1-201ENST00000568218 2529 ntBASIC26.45■■□□□ 1.83
CRABP2P29373 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
CRABP2P29373 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.45■■□□□ 1.82
CRABP2P29373 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
CRABP2P29373 AL135925.1-201ENST00000605920 1701 ntBASIC26.45■■□□□ 1.82
CRABP2P29373 WASH5P-204ENST00000632292 975 ntBASIC26.44■■□□□ 1.82
CRABP2P29373 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CRABP2P29373 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CRABP2P29373 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.42■■□□□ 1.82
CRABP2P29373 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.42■■□□□ 1.82
CRABP2P29373 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CRABP2P29373 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.39■■□□□ 1.82
CRABP2P29373 AL133380.1-201ENST00000506013 324 ntBASIC26.38■■□□□ 1.81
CRABP2P29373 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CRABP2P29373 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.37■■□□□ 1.81
CRABP2P29373 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.36■■□□□ 1.81
CRABP2P29373 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CRABP2P29373 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
CRABP2P29373 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CRABP2P29373 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.35■■□□□ 1.81
CRABP2P29373 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CRABP2P29373 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CRABP2P29373 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CRABP2P29373 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CRABP2P29373 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRABP2P29373 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
CRABP2P29373 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.31■■□□□ 1.8
CRABP2P29373 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CRABP2P29373 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CRABP2P29373 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRABP2P29373 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CRABP2P29373 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRABP2P29373 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRABP2P29373 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CRABP2P29373 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CRABP2P29373 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CRABP2P29373 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CRABP2P29373 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CRABP2P29373 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRABP2P29373 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRABP2P29373 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.25■■□□□ 1.79
CRABP2P29373 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CRABP2P29373 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CRABP2P29373 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRABP2P29373 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
CRABP2P29373 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.22■■□□□ 1.79
CRABP2P29373 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CRABP2P29373 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CRABP2P29373 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CRABP2P29373 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.2■■□□□ 1.78
CRABP2P29373 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.19■■□□□ 1.78
CRABP2P29373 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CRABP2P29373 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.17■■□□□ 1.78
CRABP2P29373 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CRABP2P29373 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CRABP2P29373 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CRABP2P29373 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CRABP2P29373 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CRABP2P29373 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CRABP2P29373 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CRABP2P29373 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.14■■□□□ 1.78
CRABP2P29373 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CRABP2P29373 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
CRABP2P29373 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CRABP2P29373 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CRABP2P29373 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CRABP2P29373 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.13■■□□□ 1.77
CRABP2P29373 RARRES2P7-201ENST00000567349 469 ntBASIC26.13■■□□□ 1.77
CRABP2P29373 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CRABP2P29373 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.12■■□□□ 1.77
CRABP2P29373 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CRABP2P29373 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
CRABP2P29373 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CRABP2P29373 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CRABP2P29373 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CRABP2P29373 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CRABP2P29373 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CRABP2P29373 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CRABP2P29373 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
CRABP2P29373 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CRABP2P29373 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CRABP2P29373 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms