Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
POLR3DP05423 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
POLR3DP05423 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
POLR3DP05423 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
POLR3DP05423 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.95■■■□□ 2.71
POLR3DP05423 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
POLR3DP05423 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
POLR3DP05423 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.93■■■□□ 2.7
POLR3DP05423 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
POLR3DP05423 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.92■■■□□ 2.7
POLR3DP05423 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
POLR3DP05423 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.92■■■□□ 2.7
POLR3DP05423 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.91■■■□□ 2.7
POLR3DP05423 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.89■■■□□ 2.7
POLR3DP05423 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.89■■■□□ 2.7
POLR3DP05423 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
POLR3DP05423 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
POLR3DP05423 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
POLR3DP05423 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.88■■■□□ 2.69
POLR3DP05423 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
POLR3DP05423 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
POLR3DP05423 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
POLR3DP05423 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
POLR3DP05423 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.87■■■□□ 2.69
POLR3DP05423 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
POLR3DP05423 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.86■■■□□ 2.69
POLR3DP05423 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
POLR3DP05423 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.85■■■□□ 2.69
POLR3DP05423 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
POLR3DP05423 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
POLR3DP05423 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
POLR3DP05423 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
POLR3DP05423 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
POLR3DP05423 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
POLR3DP05423 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
POLR3DP05423 ABHD17AP4-201ENST00000411545 909 ntBASIC31.82■■■□□ 2.68
POLR3DP05423 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.82■■■□□ 2.68
POLR3DP05423 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.82■■■□□ 2.68
POLR3DP05423 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
POLR3DP05423 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
POLR3DP05423 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
POLR3DP05423 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
POLR3DP05423 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
POLR3DP05423 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.78■■■□□ 2.68
POLR3DP05423 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
POLR3DP05423 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.77■■■□□ 2.68
POLR3DP05423 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
POLR3DP05423 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.76■■■□□ 2.67
POLR3DP05423 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
POLR3DP05423 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
POLR3DP05423 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
POLR3DP05423 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
POLR3DP05423 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
POLR3DP05423 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.73■■■□□ 2.67
POLR3DP05423 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.73■■■□□ 2.67
POLR3DP05423 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
POLR3DP05423 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
POLR3DP05423 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
POLR3DP05423 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.71■■■□□ 2.67
POLR3DP05423 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.71■■■□□ 2.67
POLR3DP05423 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
POLR3DP05423 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.7■■■□□ 2.67
POLR3DP05423 AL161658.1-201ENST00000623641 1967 ntBASIC31.7■■■□□ 2.66
POLR3DP05423 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
POLR3DP05423 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
POLR3DP05423 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
POLR3DP05423 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
POLR3DP05423 AC108673.1-201ENST00000510422 1159 ntBASIC31.67■■■□□ 2.66
POLR3DP05423 MIR7108-201ENST00000614319 87 ntBASIC31.66■■■□□ 2.66
POLR3DP05423 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
POLR3DP05423 MIR6090-201ENST00000622481 60 ntBASIC31.65■■■□□ 2.66
POLR3DP05423 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
POLR3DP05423 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
POLR3DP05423 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.64■■■□□ 2.66
POLR3DP05423 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.64■■■□□ 2.65
POLR3DP05423 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.63■■■□□ 2.65
POLR3DP05423 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.63■■■□□ 2.65
POLR3DP05423 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.63■■■□□ 2.65
POLR3DP05423 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.63■■■□□ 2.65
POLR3DP05423 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
POLR3DP05423 DUX4L29-201ENST00000425409 679 ntBASIC31.62■■■□□ 2.65
POLR3DP05423 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
POLR3DP05423 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
POLR3DP05423 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
POLR3DP05423 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.6■■■□□ 2.65
POLR3DP05423 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.6■■■□□ 2.65
POLR3DP05423 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
POLR3DP05423 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
POLR3DP05423 ZNRF2P2-203ENST00000454624 420 ntBASIC31.59■■■□□ 2.65
POLR3DP05423 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
POLR3DP05423 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
POLR3DP05423 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
POLR3DP05423 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.65
POLR3DP05423 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
POLR3DP05423 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
POLR3DP05423 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
POLR3DP05423 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.56■■■□□ 2.64
POLR3DP05423 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.56■■■□□ 2.64
POLR3DP05423 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
POLR3DP05423 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.56■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms