Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
PRAMEF11O60813 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
PRAMEF11O60813 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PRAMEF11O60813 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.26■■□□□ 1.95
PRAMEF11O60813 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PRAMEF11O60813 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
PRAMEF11O60813 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PRAMEF11O60813 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PRAMEF11O60813 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PRAMEF11O60813 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PRAMEF11O60813 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.23■■□□□ 1.95
PRAMEF11O60813 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
PRAMEF11O60813 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PRAMEF11O60813 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
PRAMEF11O60813 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.22■■□□□ 1.95
PRAMEF11O60813 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.22■■□□□ 1.95
PRAMEF11O60813 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
PRAMEF11O60813 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.19■■□□□ 1.94
PRAMEF11O60813 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.19■■□□□ 1.94
PRAMEF11O60813 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PRAMEF11O60813 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PRAMEF11O60813 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PRAMEF11O60813 AP006261.1-201ENST00000584783 668 ntBASIC27.18■■□□□ 1.94
PRAMEF11O60813 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
PRAMEF11O60813 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.18■■□□□ 1.94
PRAMEF11O60813 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PRAMEF11O60813 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.17■■□□□ 1.94
PRAMEF11O60813 AC005559.1-201ENST00000589661 871 ntBASIC27.16■■□□□ 1.94
PRAMEF11O60813 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PRAMEF11O60813 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.15■■□□□ 1.94
PRAMEF11O60813 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PRAMEF11O60813 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PRAMEF11O60813 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PRAMEF11O60813 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.14■■□□□ 1.94
PRAMEF11O60813 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PRAMEF11O60813 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PRAMEF11O60813 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PRAMEF11O60813 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.13■■□□□ 1.93
PRAMEF11O60813 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.13■■□□□ 1.93
PRAMEF11O60813 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.12■■□□□ 1.93
PRAMEF11O60813 DUX4L28-201ENST00000623687 678 ntBASIC27.12■■□□□ 1.93
PRAMEF11O60813 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PRAMEF11O60813 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
PRAMEF11O60813 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
PRAMEF11O60813 AL162393.1-201ENST00000437852 946 ntBASIC27.1■■□□□ 1.93
PRAMEF11O60813 MIR3665-201ENST00000578708 105 ntBASIC27.1■■□□□ 1.93
PRAMEF11O60813 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PRAMEF11O60813 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
PRAMEF11O60813 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.09■■□□□ 1.93
PRAMEF11O60813 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.09■■□□□ 1.93
PRAMEF11O60813 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PRAMEF11O60813 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PRAMEF11O60813 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
PRAMEF11O60813 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PRAMEF11O60813 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.07■■□□□ 1.92
PRAMEF11O60813 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
PRAMEF11O60813 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PRAMEF11O60813 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PRAMEF11O60813 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
PRAMEF11O60813 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PRAMEF11O60813 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PRAMEF11O60813 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PRAMEF11O60813 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PRAMEF11O60813 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.04■■□□□ 1.92
PRAMEF11O60813 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.04■■□□□ 1.92
PRAMEF11O60813 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PRAMEF11O60813 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
PRAMEF11O60813 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.01■■□□□ 1.91
PRAMEF11O60813 AL135925.1-201ENST00000605920 1701 ntBASIC27.01■■□□□ 1.91
PRAMEF11O60813 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27■■□□□ 1.91
PRAMEF11O60813 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PRAMEF11O60813 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PRAMEF11O60813 AC087741.3-201ENST00000624270 1347 ntBASIC26.97■■□□□ 1.91
PRAMEF11O60813 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
PRAMEF11O60813 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.97■■□□□ 1.91
PRAMEF11O60813 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.97■■□□□ 1.91
PRAMEF11O60813 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.97■■□□□ 1.91
PRAMEF11O60813 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PRAMEF11O60813 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
PRAMEF11O60813 RPS2P35-201ENST00000443417 897 ntBASIC26.95■■□□□ 1.9
PRAMEF11O60813 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
PRAMEF11O60813 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PRAMEF11O60813 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PRAMEF11O60813 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PRAMEF11O60813 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.94■■□□□ 1.9
PRAMEF11O60813 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
PRAMEF11O60813 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PRAMEF11O60813 AC010864.1-201ENST00000609407 1511 ntBASIC26.93■■□□□ 1.9
PRAMEF11O60813 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PRAMEF11O60813 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PRAMEF11O60813 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PRAMEF11O60813 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
PRAMEF11O60813 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.92■■□□□ 1.9
PRAMEF11O60813 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PRAMEF11O60813 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.91■■□□□ 1.9
PRAMEF11O60813 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
PRAMEF11O60813 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PRAMEF11O60813 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
PRAMEF11O60813 ST7-AS1-201ENST00000456775 1889 ntBASIC26.89■■□□□ 1.9
PRAMEF11O60813 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms