Protein–RNA interactions for Protein: O60784

TOM1, Target of Myb protein 1, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1O60784 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
TOM1O60784 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
TOM1O60784 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
TOM1O60784 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC38.35■■■■□ 3.73
TOM1O60784 MIR6090-201ENST00000622481 60 ntBASIC38.34■■■■□ 3.73
TOM1O60784 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
TOM1O60784 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
TOM1O60784 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC38.3■■■■□ 3.72
TOM1O60784 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC38.29■■■■□ 3.72
TOM1O60784 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC38.29■■■■□ 3.72
TOM1O60784 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC38.28■■■■□ 3.72
TOM1O60784 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC38.28■■■■□ 3.72
TOM1O60784 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC38.26■■■■□ 3.72
TOM1O60784 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
TOM1O60784 SRP68-213ENST00000629930 165 ntTSL 5 BASIC38.25■■■■□ 3.71
TOM1O60784 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC38.24■■■■□ 3.71
TOM1O60784 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
TOM1O60784 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC38.22■■■■□ 3.71
TOM1O60784 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC38.22■■■■□ 3.71
TOM1O60784 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
TOM1O60784 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC38.2■■■■□ 3.71
TOM1O60784 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC38.19■■■■□ 3.7
TOM1O60784 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC38.19■■■■□ 3.7
TOM1O60784 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC38.19■■■■□ 3.7
TOM1O60784 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
TOM1O60784 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC38.18■■■■□ 3.7
TOM1O60784 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC38.18■■■■□ 3.7
TOM1O60784 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
TOM1O60784 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
TOM1O60784 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC38.17■■■■□ 3.7
TOM1O60784 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC38.16■■■■□ 3.7
TOM1O60784 AC012354.3-201ENST00000623734 483 ntBASIC38.16■■■■□ 3.7
TOM1O60784 RNF126P1-201ENST00000567452 1320 ntBASIC38.15■■■■□ 3.7
TOM1O60784 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC38.15■■■■□ 3.7
TOM1O60784 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC38.15■■■■□ 3.7
TOM1O60784 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC38.14■■■■□ 3.7
TOM1O60784 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC38.14■■■■□ 3.7
TOM1O60784 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC38.14■■■■□ 3.7
TOM1O60784 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
TOM1O60784 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
TOM1O60784 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
TOM1O60784 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
TOM1O60784 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
TOM1O60784 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC38.13■■■■□ 3.69
TOM1O60784 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC38.13■■■■□ 3.69
TOM1O60784 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC38.13■■■■□ 3.69
TOM1O60784 GPX1-201ENST00000419349 1106 ntBASIC38.12■■■■□ 3.69
TOM1O60784 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
TOM1O60784 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC38.09■■■■□ 3.69
TOM1O60784 DUX4L13-201ENST00000554103 1267 ntBASIC38.09■■■■□ 3.69
TOM1O60784 DUX4L15-201ENST00000611059 1267 ntBASIC38.09■■■■□ 3.69
TOM1O60784 DUX4L23-201ENST00000615195 1269 ntBASIC38.09■■■■□ 3.69
TOM1O60784 DUX4L24-201ENST00000617576 1269 ntBASIC38.09■■■■□ 3.69
TOM1O60784 DUX4L22-201ENST00000618238 1269 ntBASIC38.09■■■■□ 3.69
TOM1O60784 DUX4L20-201ENST00000619712 1269 ntBASIC38.09■■■■□ 3.69
TOM1O60784 DUX4L21-201ENST00000622058 1269 ntBASIC38.09■■■■□ 3.69
TOM1O60784 DUX4L10-201ENST00000622460 1267 ntBASIC38.09■■■■□ 3.69
TOM1O60784 DUX4L25-201ENST00000624915 1269 ntBASIC38.09■■■■□ 3.69
TOM1O60784 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC38.08■■■■□ 3.69
TOM1O60784 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC38.07■■■■□ 3.68
TOM1O60784 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC38.06■■■■□ 3.68
TOM1O60784 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
TOM1O60784 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
TOM1O60784 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
TOM1O60784 HES6-205ENST00000409356 528 ntTSL 2 BASIC38.05■■■■□ 3.68
TOM1O60784 NTF6A-201ENST00000591175 560 ntBASIC38.05■■■■□ 3.68
TOM1O60784 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC38.04■■■■□ 3.68
TOM1O60784 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
TOM1O60784 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC38.02■■■■□ 3.68
TOM1O60784 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
TOM1O60784 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC38■■■■□ 3.67
TOM1O60784 AC018358.1-201ENST00000631079 1402 ntBASIC37.99■■■■□ 3.67
TOM1O60784 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
TOM1O60784 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
TOM1O60784 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC37.97■■■■□ 3.67
TOM1O60784 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
TOM1O60784 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
TOM1O60784 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
TOM1O60784 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
TOM1O60784 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
TOM1O60784 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
TOM1O60784 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC37.91■■■■□ 3.66
TOM1O60784 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
TOM1O60784 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
TOM1O60784 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC37.91■■■■□ 3.66
TOM1O60784 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
TOM1O60784 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.66
TOM1O60784 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC37.86■■■■□ 3.65
TOM1O60784 TPT1-202ENST00000379055 948 ntTSL 2 BASIC37.86■■■■□ 3.65
TOM1O60784 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC37.86■■■■□ 3.65
TOM1O60784 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
TOM1O60784 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC37.85■■■■□ 3.65
TOM1O60784 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
TOM1O60784 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC37.82■■■■□ 3.64
TOM1O60784 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC37.82■■■■□ 3.64
TOM1O60784 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC37.82■■■■□ 3.64
TOM1O60784 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
TOM1O60784 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
TOM1O60784 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
TOM1O60784 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC37.81■■■■□ 3.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms