Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
H3BM21 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
H3BM21 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
H3BM21 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
H3BM21 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.55■■□□□ 1.84
H3BM21 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
H3BM21 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
H3BM21 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.54■■□□□ 1.84
H3BM21 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.54■■□□□ 1.84
H3BM21 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
H3BM21 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
H3BM21 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
H3BM21 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
H3BM21 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.53■■□□□ 1.84
H3BM21 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
H3BM21 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
H3BM21 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
H3BM21 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.52■■□□□ 1.84
H3BM21 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
H3BM21 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.51■■□□□ 1.83
H3BM21 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
H3BM21 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.49■■□□□ 1.83
H3BM21 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
H3BM21 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
H3BM21 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
H3BM21 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.46■■□□□ 1.83
H3BM21 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
H3BM21 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.45■■□□□ 1.82
H3BM21 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.44■■□□□ 1.82
H3BM21 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.44■■□□□ 1.82
H3BM21 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
H3BM21 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
H3BM21 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
H3BM21 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
H3BM21 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
H3BM21 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
H3BM21 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.41■■□□□ 1.82
H3BM21 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
H3BM21 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
H3BM21 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
H3BM21 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
H3BM21 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.4■■□□□ 1.82
H3BM21 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
H3BM21 ZNRF2P2-203ENST00000454624 420 ntBASIC26.4■■□□□ 1.82
H3BM21 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.39■■□□□ 1.82
H3BM21 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.39■■□□□ 1.82
H3BM21 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
H3BM21 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.38■■□□□ 1.81
H3BM21 DUX4L29-201ENST00000425409 679 ntBASIC26.38■■□□□ 1.81
H3BM21 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.38■■□□□ 1.81
H3BM21 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
H3BM21 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
H3BM21 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
H3BM21 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.37■■□□□ 1.81
H3BM21 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
H3BM21 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.36■■□□□ 1.81
H3BM21 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
H3BM21 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
H3BM21 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
H3BM21 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.34■■□□□ 1.81
H3BM21 AC108673.1-201ENST00000510422 1159 ntBASIC26.34■■□□□ 1.81
H3BM21 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.34■■□□□ 1.81
H3BM21 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
H3BM21 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
H3BM21 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.33■■□□□ 1.81
H3BM21 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.32■■□□□ 1.8
H3BM21 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
H3BM21 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
H3BM21 HLA-V-202ENST00000446817 847 ntBASIC26.31■■□□□ 1.8
H3BM21 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
H3BM21 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.3■■□□□ 1.8
H3BM21 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
H3BM21 AL161658.1-201ENST00000623641 1967 ntBASIC26.29■■□□□ 1.8
H3BM21 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
H3BM21 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
H3BM21 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
H3BM21 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.28■■□□□ 1.8
H3BM21 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.28■■□□□ 1.8
H3BM21 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.27■■□□□ 1.8
H3BM21 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
H3BM21 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
H3BM21 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
H3BM21 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
H3BM21 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
H3BM21 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
H3BM21 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.25■■□□□ 1.79
H3BM21 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.24■■□□□ 1.79
H3BM21 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.24■■□□□ 1.79
H3BM21 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
H3BM21 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
H3BM21 AC021231.2-201ENST00000594613 730 ntBASIC26.24■■□□□ 1.79
H3BM21 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
H3BM21 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
H3BM21 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
H3BM21 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
H3BM21 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
H3BM21 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
H3BM21 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
H3BM21 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
H3BM21 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms