Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV10-1A0A0K0K1A3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV10-1A0A0K0K1A3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.83■□□□□ 0.6
TRBV10-1A0A0K0K1A3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV10-1A0A0K0K1A3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV10-1A0A0K0K1A3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV10-1A0A0K0K1A3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV10-1A0A0K0K1A3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV10-1A0A0K0K1A3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRBV10-1A0A0K0K1A3 WASH5P-204ENST00000632292 975 ntBASIC18.81■□□□□ 0.6
TRBV10-1A0A0K0K1A3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV10-1A0A0K0K1A3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV10-1A0A0K0K1A3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV10-1A0A0K0K1A3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV10-1A0A0K0K1A3 AL135925.1-201ENST00000605920 1701 ntBASIC18.79■□□□□ 0.6
TRBV10-1A0A0K0K1A3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV10-1A0A0K0K1A3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV10-1A0A0K0K1A3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV10-1A0A0K0K1A3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV10-1A0A0K0K1A3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRBV10-1A0A0K0K1A3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV10-1A0A0K0K1A3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV10-1A0A0K0K1A3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV10-1A0A0K0K1A3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.77■□□□□ 0.6
TRBV10-1A0A0K0K1A3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRBV10-1A0A0K0K1A3 AL133380.1-201ENST00000506013 324 ntBASIC18.76■□□□□ 0.59
TRBV10-1A0A0K0K1A3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TRBV10-1A0A0K0K1A3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV10-1A0A0K0K1A3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV10-1A0A0K0K1A3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRBV10-1A0A0K0K1A3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV10-1A0A0K0K1A3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRBV10-1A0A0K0K1A3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.73■□□□□ 0.59
TRBV10-1A0A0K0K1A3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV10-1A0A0K0K1A3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV10-1A0A0K0K1A3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRBV10-1A0A0K0K1A3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV10-1A0A0K0K1A3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV10-1A0A0K0K1A3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRBV10-1A0A0K0K1A3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV10-1A0A0K0K1A3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV10-1A0A0K0K1A3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV10-1A0A0K0K1A3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV10-1A0A0K0K1A3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRBV10-1A0A0K0K1A3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV10-1A0A0K0K1A3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV10-1A0A0K0K1A3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRBV10-1A0A0K0K1A3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.67■□□□□ 0.58
TRBV10-1A0A0K0K1A3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV10-1A0A0K0K1A3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV10-1A0A0K0K1A3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.67■□□□□ 0.58
TRBV10-1A0A0K0K1A3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV10-1A0A0K0K1A3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV10-1A0A0K0K1A3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRBV10-1A0A0K0K1A3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV10-1A0A0K0K1A3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV10-1A0A0K0K1A3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TRBV10-1A0A0K0K1A3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV10-1A0A0K0K1A3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV10-1A0A0K0K1A3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.65■□□□□ 0.58
TRBV10-1A0A0K0K1A3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV10-1A0A0K0K1A3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV10-1A0A0K0K1A3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV10-1A0A0K0K1A3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.64■□□□□ 0.57
TRBV10-1A0A0K0K1A3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV10-1A0A0K0K1A3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV10-1A0A0K0K1A3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRBV10-1A0A0K0K1A3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV10-1A0A0K0K1A3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV10-1A0A0K0K1A3 AC139426.1-201ENST00000568218 2529 ntBASIC18.6■□□□□ 0.57
TRBV10-1A0A0K0K1A3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV10-1A0A0K0K1A3 RARRES2P7-201ENST00000567349 469 ntBASIC18.59■□□□□ 0.57
TRBV10-1A0A0K0K1A3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV10-1A0A0K0K1A3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV10-1A0A0K0K1A3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV10-1A0A0K0K1A3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV10-1A0A0K0K1A3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV10-1A0A0K0K1A3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.58■□□□□ 0.56
TRBV10-1A0A0K0K1A3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV10-1A0A0K0K1A3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV10-1A0A0K0K1A3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV10-1A0A0K0K1A3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV10-1A0A0K0K1A3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV10-1A0A0K0K1A3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV10-1A0A0K0K1A3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV10-1A0A0K0K1A3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV10-1A0A0K0K1A3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
TRBV10-1A0A0K0K1A3 SETD8P1-201ENST00000623146 1180 ntBASIC18.54■□□□□ 0.56
TRBV10-1A0A0K0K1A3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV10-1A0A0K0K1A3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.53■□□□□ 0.56
TRBV10-1A0A0K0K1A3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TRBV10-1A0A0K0K1A3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRBV10-1A0A0K0K1A3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV10-1A0A0K0K1A3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRBV10-1A0A0K0K1A3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV10-1A0A0K0K1A3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV10-1A0A0K0K1A3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV10-1A0A0K0K1A3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV10-1A0A0K0K1A3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV10-1A0A0K0K1A3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms