Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC055733.4-201ENST00000638462 1354 ntBASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 MIR6084-201ENST00000622012 110 ntBASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.77■□□□□ 0.11
HLA-DRB4X5D2U9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 AC027612.3-201ENST00000413684 1047 ntBASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 TPRG1LP1-201ENST00000598702 760 ntBASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HLA-DRB4X5D2U9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DRB4X5D2U9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DRB4X5D2U9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms