Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 AC099791.1-201ENST00000416440 715 ntBASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 AC105233.4-201ENST00000642045 216 ntBASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHA3Q9Y5H8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 PLK5-205ENST00000642079 1969 ntBASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 AC005224.4-201ENST00000583262 1652 ntBASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 LINC01006-201ENST00000333319 2292 ntBASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA3Q9Y5H8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHA3Q9Y5H8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHA3Q9Y5H8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHA3Q9Y5H8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 AC006128.1-201ENST00000624704 1661 ntBASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 TSPY26P-201ENST00000476365 1326 ntBASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHA3Q9Y5H8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 PBX2P1-201ENST00000493219 1291 ntBASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 AC027682.1-201ENST00000562846 899 ntBASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PCDHA3Q9Y5H8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 AC096631.2-201ENST00000436136 790 ntBASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 AC106739.1-201ENST00000617035 715 ntBASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 BX005040.4-201ENST00000637145 1518 ntBASIC21.93■■□□□ 1.1
PCDHA3Q9Y5H8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA3Q9Y5H8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA3Q9Y5H8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHA3Q9Y5H8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA3Q9Y5H8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA3Q9Y5H8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA3Q9Y5H8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA3Q9Y5H8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA3Q9Y5H8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCDHA3Q9Y5H8 AC008406.3-201ENST00000620001 1374 ntBASIC21.92■■□□□ 1.1
PCDHA3Q9Y5H8 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms