Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 PVT1_1.1-201ENST00000615125 194 ntBASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LSM5Q9Y4Y9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.27■□□□□ 0.36
LSM5Q9Y4Y9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
LSM5Q9Y4Y9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LSM5Q9Y4Y9 HCG11-201ENST00000411553 5696 ntBASIC17.27■□□□□ 0.35
LSM5Q9Y4Y9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LSM5Q9Y4Y9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LSM5Q9Y4Y9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LSM5Q9Y4Y9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.27■□□□□ 0.35
LSM5Q9Y4Y9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.26■□□□□ 0.35
LSM5Q9Y4Y9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 RARRES2P2-201ENST00000394842 485 ntBASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 AC006128.1-201ENST00000624704 1661 ntBASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms