Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
MRPS28Q9Y2Q9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.06■□□□□ 0.48
MRPS28Q9Y2Q9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPS28Q9Y2Q9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.06■□□□□ 0.48
MRPS28Q9Y2Q9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPS28Q9Y2Q9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MRPS28Q9Y2Q9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 AL356441.2-201ENST00000443009 864 ntBASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
MRPS28Q9Y2Q9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPS28Q9Y2Q9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
MRPS28Q9Y2Q9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.02■□□□□ 0.48
MRPS28Q9Y2Q9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.02■□□□□ 0.47
MRPS28Q9Y2Q9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
MRPS28Q9Y2Q9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
MRPS28Q9Y2Q9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
MRPS28Q9Y2Q9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.02■□□□□ 0.47
MRPS28Q9Y2Q9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.02■□□□□ 0.47
MRPS28Q9Y2Q9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.02■□□□□ 0.47
MRPS28Q9Y2Q9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.01■□□□□ 0.47
MRPS28Q9Y2Q9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MRPS28Q9Y2Q9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.01■□□□□ 0.47
MRPS28Q9Y2Q9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRPS28Q9Y2Q9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MRPS28Q9Y2Q9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRPS28Q9Y2Q9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MRPS28Q9Y2Q9 SMUG1P1-201ENST00000590640 811 ntBASIC18.01■□□□□ 0.47
MRPS28Q9Y2Q9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.01■□□□□ 0.47
MRPS28Q9Y2Q9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRPS28Q9Y2Q9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms