Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX6Q9UNH7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.31■□□□□ 0.84
SNX6Q9UNH7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX6Q9UNH7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX6Q9UNH7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX6Q9UNH7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.31■□□□□ 0.84
SNX6Q9UNH7 SUDS3P1-201ENST00000505831 966 ntBASIC20.31■□□□□ 0.84
SNX6Q9UNH7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.31■□□□□ 0.84
SNX6Q9UNH7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.31■□□□□ 0.84
SNX6Q9UNH7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SNX6Q9UNH7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SNX6Q9UNH7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.3■□□□□ 0.84
SNX6Q9UNH7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX6Q9UNH7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 AC012414.1-201ENST00000556676 535 ntBASIC20.29■□□□□ 0.84
SNX6Q9UNH7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.29■□□□□ 0.84
SNX6Q9UNH7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.28■□□□□ 0.84
SNX6Q9UNH7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX6Q9UNH7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.28■□□□□ 0.84
SNX6Q9UNH7 AL354811.1-201ENST00000610286 706 ntBASIC20.28■□□□□ 0.84
SNX6Q9UNH7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.28■□□□□ 0.84
SNX6Q9UNH7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SNX6Q9UNH7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX6Q9UNH7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX6Q9UNH7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.27■□□□□ 0.84
SNX6Q9UNH7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SNX6Q9UNH7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX6Q9UNH7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNX6Q9UNH7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNX6Q9UNH7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX6Q9UNH7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.27■□□□□ 0.84
SNX6Q9UNH7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.27■□□□□ 0.84
SNX6Q9UNH7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNX6Q9UNH7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.27■□□□□ 0.84
SNX6Q9UNH7 AC142381.2-201ENST00000566120 298 ntBASIC20.27■□□□□ 0.84
SNX6Q9UNH7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SNX6Q9UNH7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNX6Q9UNH7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SNX6Q9UNH7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.27■□□□□ 0.83
SNX6Q9UNH7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNX6Q9UNH7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNX6Q9UNH7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX6Q9UNH7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.24■□□□□ 0.83
SNX6Q9UNH7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms