Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 AC093787.1-201ENST00000450396 207 ntBASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 AL162412.1-201ENST00000567129 965 ntBASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 AC066615.1-201ENST00000640911 628 ntBASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NLGN3Q9NZ94 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLGN3Q9NZ94 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NLGN3Q9NZ94 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NLGN3Q9NZ94 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 RNA5SP413-201ENST00000516373 109 ntBASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 AL591742.1-201ENST00000604433 565 ntBASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 RBM17P2-201ENST00000616397 1405 ntBASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLGN3Q9NZ94 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 C1orf229-201ENST00000623686 2258 ntBASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 BX276092.2-201ENST00000417668 665 ntBASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 POU5F1P3-201ENST00000428824 1078 ntBASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 AC243732.1-201ENST00000612648 864 ntBASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLGN3Q9NZ94 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NLGN3Q9NZ94 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NLGN3Q9NZ94 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.55■□□□□ 0.88
NLGN3Q9NZ94 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NLGN3Q9NZ94 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.55■□□□□ 0.88
NLGN3Q9NZ94 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLGN3Q9NZ94 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NLGN3Q9NZ94 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLGN3Q9NZ94 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLGN3Q9NZ94 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLGN3Q9NZ94 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NLGN3Q9NZ94 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.54■□□□□ 0.88
NLGN3Q9NZ94 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms