Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.27■■□□□ 1
ABCF3Q9NUQ8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.27■■□□□ 1
ABCF3Q9NUQ8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.27■■□□□ 1
ABCF3Q9NUQ8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ABCF3Q9NUQ8 AC136469.2-201ENST00000623944 1028 ntBASIC21.27■■□□□ 1
ABCF3Q9NUQ8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
ABCF3Q9NUQ8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.27■■□□□ 1
ABCF3Q9NUQ8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ABCF3Q9NUQ8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ABCF3Q9NUQ8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ABCF3Q9NUQ8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ABCF3Q9NUQ8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
ABCF3Q9NUQ8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ABCF3Q9NUQ8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ABCF3Q9NUQ8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 SLC47A1P1-202ENST00000449666 945 ntBASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.25■□□□□ 0.99
ABCF3Q9NUQ8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 AC008764.7-201ENST00000593779 1081 ntBASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCF3Q9NUQ8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCF3Q9NUQ8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ABCF3Q9NUQ8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.22■□□□□ 0.99
ABCF3Q9NUQ8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ABCF3Q9NUQ8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ABCF3Q9NUQ8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.22■□□□□ 0.99
ABCF3Q9NUQ8 AL139246.5-201ENST00000606645 996 ntBASIC21.22■□□□□ 0.99
ABCF3Q9NUQ8 AC106739.1-201ENST00000617035 715 ntBASIC21.22■□□□□ 0.99
ABCF3Q9NUQ8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ABCF3Q9NUQ8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ABCF3Q9NUQ8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.22■□□□□ 0.99
ABCF3Q9NUQ8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
ABCF3Q9NUQ8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCF3Q9NUQ8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.21■□□□□ 0.99
ABCF3Q9NUQ8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.21■□□□□ 0.99
ABCF3Q9NUQ8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ABCF3Q9NUQ8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ABCF3Q9NUQ8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCF3Q9NUQ8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.21■□□□□ 0.99
ABCF3Q9NUQ8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ABCF3Q9NUQ8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms