Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
DDX4Q9NQI0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 RNA5SP413-201ENST00000516373 109 ntBASIC24.98■■□□□ 1.59
DDX4Q9NQI0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
DDX4Q9NQI0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
DDX4Q9NQI0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
DDX4Q9NQI0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX4Q9NQI0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.97■■□□□ 1.59
DDX4Q9NQI0 AC091799.1-201ENST00000422823 811 ntBASIC24.97■■□□□ 1.59
DDX4Q9NQI0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX4Q9NQI0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.97■■□□□ 1.59
DDX4Q9NQI0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
DDX4Q9NQI0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
DDX4Q9NQI0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.95■■□□□ 1.59
DDX4Q9NQI0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.95■■□□□ 1.59
DDX4Q9NQI0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DDX4Q9NQI0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.95■■□□□ 1.58
DDX4Q9NQI0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX4Q9NQI0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
DDX4Q9NQI0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
DDX4Q9NQI0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX4Q9NQI0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
DDX4Q9NQI0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 FAM201B-201ENST00000458407 597 ntBASIC24.93■■□□□ 1.58
DDX4Q9NQI0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 AC091874.3-201ENST00000512672 1195 ntBASIC24.93■■□□□ 1.58
DDX4Q9NQI0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 AC066615.1-201ENST00000640911 628 ntBASIC24.93■■□□□ 1.58
DDX4Q9NQI0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.93■■□□□ 1.58
DDX4Q9NQI0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX4Q9NQI0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.92■■□□□ 1.58
DDX4Q9NQI0 POU5F1P3-201ENST00000428824 1078 ntBASIC24.92■■□□□ 1.58
DDX4Q9NQI0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.92■■□□□ 1.58
DDX4Q9NQI0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
DDX4Q9NQI0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
DDX4Q9NQI0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms