Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MIR6084-201ENST00000622012 110 ntBASIC20.1■□□□□ 0.81
BRF2Q9HAW0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
BRF2Q9HAW0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BRF2Q9HAW0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.1■□□□□ 0.81
BRF2Q9HAW0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRF2Q9HAW0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRF2Q9HAW0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRF2Q9HAW0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRF2Q9HAW0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRF2Q9HAW0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
BRF2Q9HAW0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.08■□□□□ 0.81
BRF2Q9HAW0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.08■□□□□ 0.81
BRF2Q9HAW0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
BRF2Q9HAW0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRF2Q9HAW0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRF2Q9HAW0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BRF2Q9HAW0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
BRF2Q9HAW0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BRF2Q9HAW0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
BRF2Q9HAW0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
BRF2Q9HAW0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
BRF2Q9HAW0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BRF2Q9HAW0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
BRF2Q9HAW0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 AC079140.4-201ENST00000507448 529 ntBASIC20.07■□□□□ 0.8
BRF2Q9HAW0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRF2Q9HAW0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 KRT87P-202ENST00000534226 1464 ntBASIC20.06■□□□□ 0.8
BRF2Q9HAW0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRF2Q9HAW0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRF2Q9HAW0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.04■□□□□ 0.8
BRF2Q9HAW0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRF2Q9HAW0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
BRF2Q9HAW0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRF2Q9HAW0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRF2Q9HAW0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRF2Q9HAW0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.04■□□□□ 0.8
BRF2Q9HAW0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRF2Q9HAW0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRF2Q9HAW0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRF2Q9HAW0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
BRF2Q9HAW0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRF2Q9HAW0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRF2Q9HAW0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.03■□□□□ 0.8
BRF2Q9HAW0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms